G776163


Basic Information

Item Value
gene id G776163
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 17180945 ~ 17181647 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU884467
cttcaatgccccatgttgcaaggatcttgAGATGTtctggatcaacatgtacgacaacatgttccagttcccaccaatatccagcaacttcgcacagccattgaagaggagtgggacaacattccacaggccacaatcaacagcctgatcaactctatgtgaaggagatgtgtcacgctgcataaggcaaatggtggtcacaccaaatactgactggttttctgatctacgtcccattttttaaaggtatctgtgaccaacagatgcatatctgtattcccagctaCGTTAAATCCATAgtgcctaatgcatttatttcaattgactgatttccttatatgaactgtaactgtgTTTAGAAGAGAAGTGTAACTGTGTTTAGAACTGTAACTGTGTTTAGAAGAGAAGTGTAACTGTGTTTAGAACTGTAACTGTGTTTAGAAGAGAAGTGTAACTGTGTTTAGAACTGTAACTGTGTTTAGAAGAGAAGTGTAACTGTGTTTAGAACTGTAACTGTGTTTAGAAGAGAAGTGTAACTGTGTTTAGAACTGTAACTGTGTTTAGAAGAGAAGTGTAACTGTGTTTAGAACTGTAACTGTGTTTAGAAGAGAAGTGTAACTGTGTTTAGAACTGTAACTGTGTTTAGAAGAGAAGTGTAACTGTGTTTAGAACTGTAACTGTGTTTAGAAGAGAAGTGCAGCCC

Function

NR:

description
Transposable element Tcb2 transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU884467 True 703 lncRNA 0.39 1 17180945 17181647

Neighbor

gene id symbol gene type direction distance location
LOC110531641 NA coding upstream 57893 17105612 ~ 17123052 (+)
LOC110531637 LOC106577790 coding upstream 166260 17006102 ~ 17014685 (+)
LOC110531635 LOC106577792 coding upstream 203648 16966706 ~ 16977297 (+)
LOC118966193 NA coding upstream 248441 16932388 ~ 16932504 (+)
LOC118966194 NA coding upstream 252081 16928746 ~ 16928864 (+)
LOC118966008 NA coding downstream 20970 17202617 ~ 17222400 (+)
LOC118966176 NA coding downstream 59223 17240870 ~ 17242550 (+)
LOC118966167 NA coding downstream 72619 17254266 ~ 17265417 (+)
LOC118966009 NA coding downstream 84383 17266030 ~ 17269034 (+)
LOC110532942 LOC106577806 coding downstream 110823 17292470 ~ 17305629 (+)
G776126 NA non-coding upstream 56988 17123414 ~ 17123957 (+)
G776144 NA non-coding upstream 65148 17115584 ~ 17115797 (+)
G776143 NA non-coding upstream 65535 17114969 ~ 17115410 (+)
G776142 NA non-coding upstream 66046 17114512 ~ 17114899 (+)
G776136 NA non-coding upstream 82775 17097916 ~ 17098170 (+)
G776164 NA non-coding downstream 410 17182057 ~ 17182322 (+)
G776165 NA non-coding downstream 1384 17183031 ~ 17183681 (+)
G776459 NA non-coding downstream 62586 17244233 ~ 17244440 (+)
G776496 NA non-coding downstream 94793 17276440 ~ 17276641 (+)
G775945 NA other upstream 497454 16683194 ~ 16683491 (+)
LOC110532939 NA other upstream 838135 16315734 ~ 16342810 (+)
LOC110532936 LOC106577844 other upstream 930081 16233342 ~ 16250864 (+)
G775306 NA other upstream 993495 16186276 ~ 16187450 (+)
G775142 NA other upstream 1314237 15866089 ~ 15866708 (+)
G776487 NA other downstream 198978 17380625 ~ 17394121 (+)
G776818 LOC106600668 other downstream 476550 17658197 ~ 17659145 (+)
G777111 NA other downstream 820242 18001889 ~ 18002182 (+)
G777113 NA other downstream 821620 18003267 ~ 18005668 (+)

Expression


Co-expression Network