Gene
RNA
| Item | Value |
|---|---|
| gene id | G776530 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 17371771 ~ 17373560 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| transmembrane 4 L6 family member 5 |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU884878 | False | 596 | lncRNA | 0.54 | 2 | 17371771 | 17373560 |
| TU884877 | True | 1083 | lncRNA | 0.46 | 2 | 17372440 | 17373560 |
17,368,000
17,368,400
17,368,800
17,369,200
17,369,600
17,370,000
17,370,400
17,370,800
17,371,200
17,371,600
17,371,600
17,372,000
17,372,400
17,372,800
17,373,200
17,373,600
17,374,000
17,374,400
17,374,800
17,375,200
NC_048573.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531644 | mettl3 | coding | upstream | 25520 | 17339272 ~ 17346251 (+) |
| LOC110532942 | LOC106577806 | coding | upstream | 66142 | 17292470 ~ 17305629 (+) |
| LOC118966009 | NA | coding | upstream | 102737 | 17266030 ~ 17269034 (+) |
| LOC118966167 | NA | coding | upstream | 106354 | 17254266 ~ 17265417 (+) |
| LOC118966176 | NA | coding | upstream | 129221 | 17240870 ~ 17242550 (+) |
| LOC110531656 | pop7 | coding | downstream | 814178 | 18187738 ~ 18190442 (+) |
| LOC110531658 | LOC106577765 | coding | downstream | 877372 | 18250932 ~ 18256403 (+) |
| LOC110531660 | LOC106608810 | coding | downstream | 927808 | 18301368 ~ 18320759 (+) |
| LOC110531663 | LOC106577697 | coding | downstream | 1267095 | 18640655 ~ 18648675 (+) |
| LOC110531664 | LOC106577696 | coding | downstream | 1282617 | 18656177 ~ 18673318 (+) |
| G776477 | NA | non-coding | upstream | 2436 | 17364985 ~ 17369335 (+) |
| G776478 | NA | non-coding | upstream | 17343 | 17354088 ~ 17354428 (+) |
| G776483 | NA | non-coding | upstream | 40982 | 17330339 ~ 17330789 (+) |
| G776519 | NA | non-coding | upstream | 42448 | 17328963 ~ 17329323 (+) |
| G776516 | NA | non-coding | upstream | 49981 | 17320610 ~ 17321790 (+) |
| G776555 | NA | non-coding | downstream | 115751 | 17489311 ~ 17490326 (+) |
| G776485 | NA | non-coding | downstream | 125743 | 17499303 ~ 17500961 (+) |
| G776598 | NA | non-coding | downstream | 199080 | 17572640 ~ 17573045 (+) |
| G776606 | NA | non-coding | downstream | 216061 | 17589621 ~ 17592646 (+) |
| G776611 | NA | non-coding | downstream | 226135 | 17599695 ~ 17600727 (+) |
| G775945 | NA | other | upstream | 688280 | 16683194 ~ 16683491 (+) |
| LOC110532939 | NA | other | upstream | 1028961 | 16315734 ~ 16342810 (+) |
| LOC110532936 | LOC106577844 | other | upstream | 1120907 | 16233342 ~ 16250864 (+) |
| G775306 | NA | other | upstream | 1184321 | 16186276 ~ 16187450 (+) |
| G776487 | NA | other | downstream | 7065 | 17380625 ~ 17394121 (+) |
| G776818 | LOC106600668 | other | downstream | 284637 | 17658197 ~ 17659145 (+) |
| G777111 | NA | other | downstream | 628329 | 18001889 ~ 18002182 (+) |
| G777113 | NA | other | downstream | 629707 | 18003267 ~ 18005668 (+) |
| G777165 | NA | other | downstream | 734459 | 18108019 ~ 18108482 (+) |
