G776485


Basic Information

Item Value
gene id G776485
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 17499303 ~ 17500961 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU884826
ggatggagaaccAGTCTATTATAGAtacaatagagaggaggaggagggagaaccagtctattaAAGATAAATtagagatgaggggggagggCCATTCTAGtaaagctacattagagaggaggaggagagagaaccagTCCAGTACAgctacatgagagaggaggaggagggagaaccagtctagtacagctacattagagaggaggagatgggagaaccagtTTAGTATAgctacactcctctcctctacactcctctacactcctctactctacactcctctactctcctctactctctacactcctctcctctacactcctctcctctacacacctctacactcctctcctctacactcctctactctctacactcctctcctctacactcctctcctctacactcctttacactcctctcctctacactcctttacactcctctctacactcctctactctcctctcctctacactcctctcctctacactcctttACACTCCtctccacactcctctcctctacactcctttacactcctctcctctacattcctctactctcctctcctctacactcctctcctctacactcctttacactcctctctacactcctctcctctacactcctttacactcctctactctctatactcctctcctctacactcctttacgctcctctactctcctctactctctacactactctcctctacactcctctactctctacactcctctcctctacactcctctactctctacactcctctcctctacactcctctactctctaaactcctctactctctacactcctctcctctacactcctctactctctacactcctctcctctacactcctttacactcctctactctcctctactctctacactcctctcctctacactcctctactctacactcctctacactctacactcctctcctctacactcctctactctctacactcctctcctctacactcctttacactcctctactctcctcaactctctacactcctctcctctacactcctctactctctacactcctctcctctacactcctctactctctacactcctctcctctacactcctctactctctacactcctctcctctacactcctctactctctacactcctctactctctacactcatctcctctacactcctctactctctacactcctctcctctacactcctctactctctacactcctctcctctacactcctctactctctacactcctctcctctacactcctctactctctacactcctctactctctacactcctctcctctacactcctctactctctacactcctctcctctacactcctctactctctacactcctctactctctacactcctctcctctacactcctttacactcctctcctctcctctacactcctctactctacactcttctcctctacactcctctcttctacagtcctctcctctacagtcctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU884826 True 1520 lncRNA 0.49 2 17499303 17500961

Neighbor

gene id symbol gene type direction distance location
LOC110531644 mettl3 coding upstream 153052 17339272 ~ 17346251 (+)
LOC110532942 LOC106577806 coding upstream 193674 17292470 ~ 17305629 (+)
LOC118966009 NA coding upstream 230269 17266030 ~ 17269034 (+)
LOC118966167 NA coding upstream 233886 17254266 ~ 17265417 (+)
LOC118966176 NA coding upstream 256753 17240870 ~ 17242550 (+)
LOC110531656 pop7 coding downstream 686777 18187738 ~ 18190442 (+)
LOC110531658 LOC106577765 coding downstream 749971 18250932 ~ 18256403 (+)
LOC110531660 LOC106608810 coding downstream 800407 18301368 ~ 18320759 (+)
LOC110531663 LOC106577697 coding downstream 1139694 18640655 ~ 18648675 (+)
LOC110531664 LOC106577696 coding downstream 1155216 18656177 ~ 18673318 (+)
G776555 NA non-coding upstream 8977 17489311 ~ 17490326 (+)
G776524 NA non-coding upstream 46681 17355232 ~ 17452622 (+)
G776530 NA non-coding upstream 125743 17371771 ~ 17373560 (+)
G776477 NA non-coding upstream 129968 17364985 ~ 17369335 (+)
G776478 NA non-coding upstream 144875 17354088 ~ 17354428 (+)
G776598 NA non-coding downstream 71679 17572640 ~ 17573045 (+)
G776606 NA non-coding downstream 88660 17589621 ~ 17592646 (+)
G776611 NA non-coding downstream 98734 17599695 ~ 17600727 (+)
G776781 NA non-coding downstream 115327 17616288 ~ 17616818 (+)
G776790 NA non-coding downstream 122303 17623264 ~ 17623514 (+)
G776487 NA other upstream 105182 17380625 ~ 17394121 (+)
G775945 NA other upstream 815812 16683194 ~ 16683491 (+)
LOC110532939 NA other upstream 1156493 16315734 ~ 16342810 (+)
LOC110532936 LOC106577844 other upstream 1248439 16233342 ~ 16250864 (+)
G776818 LOC106600668 other downstream 157236 17658197 ~ 17659145 (+)
G777111 NA other downstream 500928 18001889 ~ 18002182 (+)
G777113 NA other downstream 502306 18003267 ~ 18005668 (+)
G777165 NA other downstream 607058 18108019 ~ 18108482 (+)
G777396 NA other downstream 998653 18499614 ~ 18500018 (+)

Expression


Co-expression Network