G776822


Basic Information

Item Value
gene id G776822
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 17659690 ~ 17660483 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU885195
GATGATGACTGAACCAAAGACAGGTGAAAAGGAAATGGAGGCGGAGAGGGAAGAATTGTCTCCACtggaaggaagaagagaggaggagagagcagctgaGGGAAAGGTCTTGGAACAAAGGAAATATCCAGGAGCTAAGCCTAAAGCAACAAAGGCTTCATCCTCaaccaccagcagcaccagaagaACCAGGCAAGCACCTGGTTATCTTAAGGATTATGTGGTCGAGTTTCCGACATCAAAGGGCAAGCCCACCAGAGCTCAAAGTGTTGATGGATCAACTATACGTTTCAGCCATCAACCATCCCCTCTGAGCCAAGGACCGGAAACTGCTTTGGAGCAGGAAAGTGGTCTACATGAAGAACCTATGGAGGAGGTAACTCCCACCG
>TU885197
CGGGAGAGTGGGCCATTCAGTTATTGTTAATAGTTATTACCGCGGAGCGCGGCTTGGAGTGCAgcttcaaacatattgtgtaatgtgaattgtcaatgatcaCAGCCCTACGGATCCTCAGAGGCCAATTATGCAATCGATATGGTTCATGTGTATTAATAATGAATTATATGATTTGATCTTTGATTATGAATTtgattggatacatgttatttgtttcctttgtgatgcagcacagacttctcagtaaatataccactttatggttaaaggaattcctgcctcagtctcatccattcctctgtcacctgacacgtgaccacctgttcaccttcactgccagtcatcctacctgtccagctacccacacagattccactaatctttcaatGGTCCTTCGAGTCGGATGATGACTGAACCAAAGACAGGTGAAAAGGAAATGGAGGCGGAGAGGGAAGAATTGTCTCCACtggaaggaagaagagaggaggagagagcagctgaGGGAAAGGTCTTGGAACAAAGGAAATATCCAGGAGCTAAGCCTAAAGCAACAAAGGCTTCATCCTCaaccaccagcagcaccagaagaACCAGGCAAGCACCTGGTTATCTTAAGGATTATGTGGTCGAGTTTCCGACATCAAAGGGCAAGCCCACCAGAGCTCAAAGTGTTGATGGATCAACTATACGTTTCAGCCATCAACCATCCCCTCTGAGCCAAGGACCGGAAACTGCTTTGGAGCAGGAAAGTGGTCTACATGAAGAACCTATGGAGGAGGTAACTCCCACCG
>TU885196
GATGATGACTGAACCAAAGACAGGTGAAAAGGAAATGGAGGCGGAGAGGGAAGAATTGTCTCCACtggaaggaagaagagaggaggagagagcagctgaGGGAAAGGTCTTGGAACAAAGGAAATATCCAGGAGCTAAGCCTAAAGCAACAAAGGCTTCATCCTCaaccaccagcagcaccagaagaACCAGGCAAGCACCTGGTTATCTTAAGGATTATGTGGTCGAGTTTCCGACATCAAAGGGCAAGCCCACCAGAGCTCAAAGTGTTGATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU885195 False 389 TUCP 0.49 1 17659690 17660078
TU885197 False 794 TUCP 0.46 1 17659690 17660483
TU885196 True 275 TUCP 0.49 1 17659804 17660078

Neighbor

gene id symbol gene type direction distance location
LOC110532943 LOC106577805 coding downstream 111788 17402378 ~ 17547902 (-)
tmem88b LOC106577776 coding downstream 262462 17390090 ~ 17397228 (-)
tm4sf5 tm4sf5 coding downstream 286042 17364983 ~ 17373648 (-)
LOC110531645 LOC106577780 coding downstream 320557 17330334 ~ 17339133 (-)
LOC110531643 LOC106577781 coding downstream 332076 17321431 ~ 17327614 (-)
LOC118966010 NA coding upstream 263587 17924070 ~ 17925788 (-)
LOC110531650 LOC106577756 coding upstream 346150 18006633 ~ 18129483 (-)
si:dkey-111f13.5 LOC106577757 coding upstream 469724 18130207 ~ 18138722 (-)
LOC110531652 NA coding upstream 487822 18148305 ~ 18154722 (-)
LOC110531653 LOC106577760 coding upstream 494359 18154842 ~ 18188576 (-)
G776819 LOC106600668 non-coding downstream 1422 17657802 ~ 17658268 (-)
G776817 LOC106600668 non-coding downstream 2350 17657056 ~ 17657340 (-)
G776816 LOC106600668 non-coding downstream 2650 17656608 ~ 17657040 (-)
G776806 NA non-coding downstream 14319 17645137 ~ 17645371 (-)
G776798 NA non-coding downstream 24235 17634909 ~ 17635455 (-)
G776870 NA non-coding upstream 34972 17695455 ~ 17695692 (-)
G776888 NA non-coding upstream 55852 17716335 ~ 17716534 (-)
G776889 NA non-coding upstream 56070 17716553 ~ 17716766 (-)
G776890 NA non-coding upstream 56439 17716922 ~ 17717154 (-)
G776905 NA non-coding upstream 68730 17729213 ~ 17729466 (-)
G776820 NA other downstream 287 17659016 ~ 17659403 (-)
G776814 LOC106600668 other downstream 3365 17655988 ~ 17656325 (-)
G776812 LOC106566110 other downstream 3710 17655594 ~ 17655980 (-)
G776762 NA other downstream 65024 17593472 ~ 17594666 (-)
G776714 NA other downstream 195868 17458677 ~ 17463822 (-)
G778216 NA other upstream 694958 18355441 ~ 18358103 (-)
G780209 NA other upstream 2157208 19817691 ~ 19824571 (-)
LOC110531704 LOC106608762 other upstream 2411513 20022194 ~ 20075490 (-)
LOC110531717 LOC106577635 other upstream 2641595 20302051 ~ 20324316 (-)
LOC110531730 adgrl3 other upstream 3270477 20930960 ~ 21272646 (-)

Expression


Co-expression Network