Gene
RNA
| Item | Value |
|---|---|
| gene id | G778046 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 17945359 ~ 17945790 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: LOW QUALITY PROTEIN: otogelin |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU886558 | True | 288 | lncRNA | 0.39 | 2 | 17945359 | 17945790 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118966010 | NA | coding | downstream | 19571 | 17924070 ~ 17925788 (-) |
| LOC110532943 | LOC106577805 | coding | downstream | 397457 | 17402378 ~ 17547902 (-) |
| tmem88b | LOC106577776 | coding | downstream | 548131 | 17390090 ~ 17397228 (-) |
| tm4sf5 | tm4sf5 | coding | downstream | 571711 | 17364983 ~ 17373648 (-) |
| LOC110531645 | LOC106577780 | coding | downstream | 606226 | 17330334 ~ 17339133 (-) |
| LOC110531650 | LOC106577756 | coding | upstream | 60843 | 18006633 ~ 18129483 (-) |
| si:dkey-111f13.5 | LOC106577757 | coding | upstream | 184417 | 18130207 ~ 18138722 (-) |
| LOC110531652 | NA | coding | upstream | 202515 | 18148305 ~ 18154722 (-) |
| LOC110531653 | LOC106577760 | coding | upstream | 209052 | 18154842 ~ 18188576 (-) |
| LOC110531655 | LOC106577763 | coding | upstream | 245061 | 18190851 ~ 18200944 (-) |
| G778045 | NA | non-coding | downstream | 1257 | 17941758 ~ 17944102 (-) |
| G778037 | NA | non-coding | downstream | 23295 | 17917764 ~ 17922064 (-) |
| G777020 | NA | non-coding | downstream | 99225 | 17845916 ~ 17846134 (-) |
| G776997 | NA | non-coding | downstream | 122675 | 17822392 ~ 17822684 (-) |
| G776994 | NA | non-coding | downstream | 125557 | 17819581 ~ 17819802 (-) |
| G778058 | NA | non-coding | upstream | 13435 | 17959225 ~ 17959540 (-) |
| G778063 | NA | non-coding | upstream | 31088 | 17976878 ~ 17977435 (-) |
| G778068 | NA | non-coding | upstream | 39511 | 17985301 ~ 17985534 (-) |
| G778086 | NA | non-coding | upstream | 73519 | 18019309 ~ 18020542 (-) |
| G778091 | NA | non-coding | upstream | 86399 | 18032189 ~ 18032400 (-) |
| G776822 | NA | other | downstream | 284876 | 17659690 ~ 17660483 (-) |
| G776820 | NA | other | downstream | 285956 | 17659016 ~ 17659403 (-) |
| G776814 | LOC106600668 | other | downstream | 289034 | 17655988 ~ 17656325 (-) |
| G776812 | LOC106566110 | other | downstream | 289379 | 17655594 ~ 17655980 (-) |
| G776762 | NA | other | downstream | 350693 | 17593472 ~ 17594666 (-) |
| G778216 | NA | other | upstream | 409651 | 18355441 ~ 18358103 (-) |
| G780209 | NA | other | upstream | 1871901 | 19817691 ~ 19824571 (-) |
| LOC110531704 | LOC106608762 | other | upstream | 2126206 | 20022194 ~ 20075490 (-) |
| LOC110531717 | LOC106577635 | other | upstream | 2356288 | 20302051 ~ 20324316 (-) |
| LOC110531730 | adgrl3 | other | upstream | 2985170 | 20930960 ~ 21272646 (-) |
