G778063


Basic Information

Item Value
gene id G778063
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 17976878 ~ 17977435 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU886581
attgcctgcctgtgtatgaccattgcctacctgtgtatgaccattgcctgcctgtgtatgaccattgcctacctgtgtatgaccattgcctgcctgtgtatgaccattgcctgcctgtgaccacgattcctgcctcCTGCGAAATAAACACCTGCCGTGCTCTGCGCGTGAAtctttctccctgagtattcattacacacTCATTCttctgtttaataaatgtattgtgtagtgtgtgtgtggcaggcttacaacgatggcaaaaaacaacatttgagagtgcgctgaccatGGTGCTAGGTACCATGGTACCATATGTACCatggtacgcagctggaggttgaatgtttgaaggggtacggggaCTTTGTCTGATATTGATGCATCTTTTTGTCTGCGCTTGCCCAGTCAAGTAAATGATCAATATTGACGGTTTTTATTTGGACGGCAAAGATGTACTCCTGACAGCCAATTATTTCTCAGACCCTCATTGATATATCTCTCTATAGCACTCACACAGTGGCAATAATAGAGGAGCGATTTGCCATCCTATAGGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU886581 True 558 lncRNA 0.46 1 17976878 17977435

Neighbor

gene id symbol gene type direction distance location
LOC118966010 NA coding downstream 51090 17924070 ~ 17925788 (-)
LOC110532943 LOC106577805 coding downstream 428976 17402378 ~ 17547902 (-)
tmem88b LOC106577776 coding downstream 579650 17390090 ~ 17397228 (-)
tm4sf5 tm4sf5 coding downstream 603230 17364983 ~ 17373648 (-)
LOC110531645 LOC106577780 coding downstream 637745 17330334 ~ 17339133 (-)
LOC110531650 LOC106577756 coding upstream 29198 18006633 ~ 18129483 (-)
si:dkey-111f13.5 LOC106577757 coding upstream 152772 18130207 ~ 18138722 (-)
LOC110531652 NA coding upstream 170870 18148305 ~ 18154722 (-)
LOC110531653 LOC106577760 coding upstream 177407 18154842 ~ 18188576 (-)
LOC110531655 LOC106577763 coding upstream 213416 18190851 ~ 18200944 (-)
G778058 NA non-coding downstream 17338 17959225 ~ 17959540 (-)
G778046 NA non-coding downstream 31088 17945359 ~ 17945790 (-)
G778045 NA non-coding downstream 32776 17941758 ~ 17944102 (-)
G778037 NA non-coding downstream 54814 17917764 ~ 17922064 (-)
G777020 NA non-coding downstream 130744 17845916 ~ 17846134 (-)
G778068 NA non-coding upstream 7866 17985301 ~ 17985534 (-)
G778086 NA non-coding upstream 41874 18019309 ~ 18020542 (-)
G778091 NA non-coding upstream 54754 18032189 ~ 18032400 (-)
G778125 NA non-coding upstream 127538 18104973 ~ 18105189 (-)
G778128 NA non-coding upstream 130694 18108129 ~ 18108474 (-)
G776822 NA other downstream 316395 17659690 ~ 17660483 (-)
G776820 NA other downstream 317475 17659016 ~ 17659403 (-)
G776814 LOC106600668 other downstream 320553 17655988 ~ 17656325 (-)
G776812 LOC106566110 other downstream 320898 17655594 ~ 17655980 (-)
G776762 NA other downstream 382212 17593472 ~ 17594666 (-)
G778216 NA other upstream 378006 18355441 ~ 18358103 (-)
G780209 NA other upstream 1840256 19817691 ~ 19824571 (-)
LOC110531704 LOC106608762 other upstream 2094561 20022194 ~ 20075490 (-)
LOC110531717 LOC106577635 other upstream 2324643 20302051 ~ 20324316 (-)
LOC110531730 adgrl3 other upstream 2953525 20930960 ~ 21272646 (-)

Expression


Co-expression Network