XLOC_026984


Basic Information

Item Value
gene id XLOC_026984
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 1857483 ~ 1862512 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00057515
TTACAACAAAACATGTATTTGTCTAGGCTCAGTTGAACTTTATTGGAAGCATGTTTATGTTATGATTATATGTTTTTGCGGGATTTGAACACACGTCTGTAGCAGCTTCATCATTTCAACACGTGACCCCACACCTGTTTTTCACTGTATAATGGTTGTattaattgatttaatatttttacatattgaacTTGTTTAAACAGTAATAAACTACATCAGTGTGCGTTTTCtatagaatatatttatttattgttgttatttttaagttTAGATAGGCCTATTTTATATGAAGATAatgatttttataataatttatttgatcaTTGTTTAGTTTCTTAAATCGATATTGATGCTGTTTTTACCTGCGTTTACAATAAAACATGAATTTGTCTCGGCTCAGTAGGATATAAACTTTGTTGGAAGCATGTTTATGTTATGA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00057515 True 439 lncRNA 0.28 2 1857483 1862512

Neighbor

gene id symbol gene type direction distance location
XLOC_026983 NA coding upstream 4829 1845630 ~ 1852654 (+)
XLOC_026982 NA coding upstream 12327 1842969 ~ 1845156 (+)
XLOC_026981 NA coding upstream 30378 1825603 ~ 1827105 (+)
XLOC_026980 pmpcb coding upstream 86175 1761029 ~ 1771308 (+)
XLOC_026979 med21 coding upstream 97928 1757462 ~ 1759555 (+)
XLOC_026985 NA coding downstream 3048 1865560 ~ 1866450 (+)
XLOC_026986 NA coding downstream 73965 1936477 ~ 1952999 (+)
XLOC_026987 NA coding downstream 87498 1950010 ~ 1974894 (+)
XLOC_026988 NA coding downstream 121151 1983663 ~ 1986858 (+)
XLOC_026989 yeats4 coding downstream 197180 2059692 ~ 2062435 (+)
XLOC_026978 NA non-coding upstream 122259 1732827 ~ 1735224 (+)
XLOC_026976 NA non-coding upstream 168126 1686486 ~ 1689357 (+)
XLOC_026994 NA non-coding downstream 483136 2345648 ~ 2349381 (+)

Expression


Co-expression Network