XLOC_026985


Basic Information

Item Value
gene id XLOC_026985
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 1865560 ~ 1866450 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00057516
GTTCAACCAAGAGTGGCCACTTTAACATCTGTTTGACAAGATCTGGATAAGTACATGGTGATTTAACAAGCTACATGTTGGATTGGGAGCTCCTCCCTCTAATCAGTAGCCCCTCCCATGGTGACAGTCTggaaaaatgtattgaaataatTTCCACCATCACCTGATCCACATGCTGGAGCCAATCACATCTCAGCCTGAGAGGAGGGTCTTCCGTAATGGACGTCCCAAACAGCACATACGGCGCCATATACATGCTTTAATCAATGTACTATTTTCTATAATAAAGTGACATCCTAAAGTGTTTTTGAAGTTATTTGTTGGTTTTAAGGCTACAAAGGACTGTAATTCATTCAAAAGTACATCAGCATGGTCATTTTCAAATACTTTATACTcacatgtgtgtttttttgtggcACTAAAGgttattatttgattaaattaagattttaatgtGAAATCATGACAAAACACAAGAAATAAATCAGATTTGCAGGAGCATATGAACTTGACAGTcaatattttgatgttttttggaGTCTGAATTGCTTGCAAATGAATTGAAGGATTATTTGGGAGgatttgtgctttattttattgatttttaagtTTATAAAGCATATTTCTTACAGAATAAACTGCATGTTTACGTTGctgttttatttaaactttaaaaacgcC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00057516 True 681 lncRNA 0.35 2 1865560 1866450

Neighbor

gene id symbol gene type direction distance location
XLOC_026984 NA coding upstream 3048 1857483 ~ 1862512 (+)
XLOC_026983 NA coding upstream 12906 1845630 ~ 1852654 (+)
XLOC_026982 NA coding upstream 20404 1842969 ~ 1845156 (+)
XLOC_026981 NA coding upstream 38455 1825603 ~ 1827105 (+)
XLOC_026980 pmpcb coding upstream 94252 1761029 ~ 1771308 (+)
XLOC_026986 NA coding downstream 70027 1936477 ~ 1952999 (+)
XLOC_026987 NA coding downstream 83560 1950010 ~ 1974894 (+)
XLOC_026988 NA coding downstream 117213 1983663 ~ 1986858 (+)
XLOC_026989 yeats4 coding downstream 193242 2059692 ~ 2062435 (+)
XLOC_026990 frs2a coding downstream 226233 2092683 ~ 2099581 (+)
XLOC_026978 NA non-coding upstream 130336 1732827 ~ 1735224 (+)
XLOC_026994 NA non-coding downstream 479198 2345648 ~ 2349381 (+)
XLOC_026995 NA non-coding downstream 486322 2352772 ~ 2355189 (+)

Expression


Co-expression Network