G777172


Basic Information

Item Value
gene id G777172
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 18122671 ~ 18122881 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU885575
CTCAGAGAGGACCGGAGGACTGGGAGGCTGGGGTGGGATTGACAGAGGGGCCACGTGCTGAGAGCGGATCCTAGATCAGAGGAAACCTGGGGGGATTTGGGGGGCACCACCCCTTGCCCatgtctccccatctctcctacaCACACCCAGGCCAAGGCCGATTAGCTTTGTTTAACCAGTGGATCAGGAGGATCAGAATCGTAGATCTCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU885575 True 211 lncRNA 0.58 1 18122671 18122881

Neighbor

gene id symbol gene type direction distance location
LOC110531644 mettl3 coding upstream 776420 17339272 ~ 17346251 (+)
LOC110532942 LOC106577806 coding upstream 817042 17292470 ~ 17305629 (+)
LOC118966009 NA coding upstream 853637 17266030 ~ 17269034 (+)
LOC118966167 NA coding upstream 857254 17254266 ~ 17265417 (+)
LOC118966176 NA coding upstream 880121 17240870 ~ 17242550 (+)
LOC110531656 pop7 coding downstream 64857 18187738 ~ 18190442 (+)
LOC110531658 LOC106577765 coding downstream 128051 18250932 ~ 18256403 (+)
LOC110531660 LOC106608810 coding downstream 178487 18301368 ~ 18320759 (+)
LOC110531663 LOC106577697 coding downstream 517774 18640655 ~ 18648675 (+)
LOC110531664 LOC106577696 coding downstream 533296 18656177 ~ 18673318 (+)
G777167 NA non-coding upstream 3350 18119113 ~ 18119321 (+)
G777162 NA non-coding upstream 16909 18105555 ~ 18105762 (+)
G777161 NA non-coding upstream 17273 18105181 ~ 18105398 (+)
G777160 NA non-coding upstream 18872 18103576 ~ 18103799 (+)
G777146 NA non-coding upstream 51987 18065796 ~ 18070684 (+)
G777173 NA non-coding downstream 693 18123574 ~ 18123808 (+)
G777176 NA non-coding downstream 2727 18125608 ~ 18125952 (+)
G777178 NA non-coding downstream 5031 18127912 ~ 18129466 (+)
G777179 NA non-coding downstream 7491 18130372 ~ 18130751 (+)
G777180 NA non-coding downstream 13366 18136247 ~ 18136650 (+)
G777165 NA other upstream 14189 18108019 ~ 18108482 (+)
G777113 NA other upstream 117003 18003267 ~ 18005668 (+)
G777111 NA other upstream 120489 18001889 ~ 18002182 (+)
G776818 LOC106600668 other upstream 463526 17658197 ~ 17659145 (+)
G776487 NA other upstream 728550 17380625 ~ 17394121 (+)
G777396 NA other downstream 376733 18499614 ~ 18500018 (+)
LOC110531694 LOC106577663 other downstream 1694807 19817663 ~ 19824606 (+)
LOC110531697 NA other downstream 1753387 19876221 ~ 19914138 (+)
LOC110531703 LOC106577651 other downstream 1886635 20009183 ~ 20090543 (+)

Expression


Co-expression Network