G777173


Basic Information

Item Value
gene id G777173
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 18123574 ~ 18123808 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU885576
GGCTAGCCTGTTCTTTTCTGCCACATCAGCTGAAAGCTCTATTCATATCTCCCGACGCTTTCGCCTCGtaaactctctctcacacagaactTGGCCTTTTCAGTTAGAGGAGCAAAAACAAGTGCCTGCTGCTGAGGATGCTTCACCGTGCAGCTAGGAGACAAGCAGCTCCTCatactctccctttctccctgagtttcatccttctctctctctatatctctctctctatatc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU885576 True 235 lncRNA 0.48 1 18123574 18123808

Neighbor

gene id symbol gene type direction distance location
LOC110531644 mettl3 coding upstream 777323 17339272 ~ 17346251 (+)
LOC110532942 LOC106577806 coding upstream 817945 17292470 ~ 17305629 (+)
LOC118966009 NA coding upstream 854540 17266030 ~ 17269034 (+)
LOC118966167 NA coding upstream 858157 17254266 ~ 17265417 (+)
LOC118966176 NA coding upstream 881024 17240870 ~ 17242550 (+)
LOC110531656 pop7 coding downstream 63930 18187738 ~ 18190442 (+)
LOC110531658 LOC106577765 coding downstream 127124 18250932 ~ 18256403 (+)
LOC110531660 LOC106608810 coding downstream 177560 18301368 ~ 18320759 (+)
LOC110531663 LOC106577697 coding downstream 516847 18640655 ~ 18648675 (+)
LOC110531664 LOC106577696 coding downstream 532369 18656177 ~ 18673318 (+)
G777172 NA non-coding upstream 693 18122671 ~ 18122881 (+)
G777167 NA non-coding upstream 4253 18119113 ~ 18119321 (+)
G777162 NA non-coding upstream 17812 18105555 ~ 18105762 (+)
G777161 NA non-coding upstream 18176 18105181 ~ 18105398 (+)
G777160 NA non-coding upstream 19775 18103576 ~ 18103799 (+)
G777176 NA non-coding downstream 1800 18125608 ~ 18125952 (+)
G777178 NA non-coding downstream 4104 18127912 ~ 18129466 (+)
G777179 NA non-coding downstream 6564 18130372 ~ 18130751 (+)
G777180 NA non-coding downstream 12439 18136247 ~ 18136650 (+)
G777201 LOC106577760 non-coding downstream 46138 18169946 ~ 18170485 (+)
G777165 NA other upstream 15092 18108019 ~ 18108482 (+)
G777113 NA other upstream 117906 18003267 ~ 18005668 (+)
G777111 NA other upstream 121392 18001889 ~ 18002182 (+)
G776818 LOC106600668 other upstream 464429 17658197 ~ 17659145 (+)
G776487 NA other upstream 729453 17380625 ~ 17394121 (+)
G777396 NA other downstream 375806 18499614 ~ 18500018 (+)
LOC110531694 LOC106577663 other downstream 1693880 19817663 ~ 19824606 (+)
LOC110531697 NA other downstream 1752460 19876221 ~ 19914138 (+)
LOC110531703 LOC106577651 other downstream 1885708 20009183 ~ 20090543 (+)

Expression


Co-expression Network