G777434


Basic Information

Item Value
gene id G777434
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 18576278 ~ 18586409 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU885856
agacagggaaacGGGACAGGTGAGGAAAACCaggacctgagccctaggaccatgccccaggaatacctgacatgatgactccttgctgtccccagtccacctgactgtgctgctgctccagtttcaactgttctgccttattattattcgaccatgctggtcagttatgaacatttgaacatcttggccatgttctgttataatctccacccggcacagccagaagaggactggccaccccacatagcctggttcctctctaggtttcttcctaggttttggcctttctagggagtttttcctagccaccgtgcttctacacctgcattgcttgctgtttggggttttaggcagggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU885856 True 357 lncRNA 0.51 2 18576278 18586409

Neighbor

gene id symbol gene type direction distance location
LOC110531660 LOC106608810 coding upstream 255519 18301368 ~ 18320759 (+)
LOC110531658 LOC106577765 coding upstream 319875 18250932 ~ 18256403 (+)
LOC110531656 pop7 coding upstream 385836 18187738 ~ 18190442 (+)
LOC110531644 mettl3 coding upstream 1230027 17339272 ~ 17346251 (+)
LOC110532942 LOC106577806 coding upstream 1270649 17292470 ~ 17305629 (+)
LOC110531663 LOC106577697 coding downstream 54246 18640655 ~ 18648675 (+)
LOC110531664 LOC106577696 coding downstream 69768 18656177 ~ 18673318 (+)
LOC110531665 LOC106577695 coding downstream 131956 18718365 ~ 18833482 (+)
LOC118966177 NA coding downstream 258867 18845276 ~ 18846593 (+)
chrnb1l LOC106577752 coding downstream 325341 18911750 ~ 18928236 (+)
G777295 NA non-coding upstream 220095 18355280 ~ 18356183 (+)
G777285 NA non-coding upstream 247483 18328505 ~ 18328795 (+)
G777283 NA non-coding upstream 252339 18323404 ~ 18323939 (+)
G777258 LOC106577766 non-coding upstream 288571 18260651 ~ 18287707 (+)
G777235 NA non-coding upstream 348522 18227535 ~ 18227756 (+)
G777448 NA non-coding downstream 7210 18593619 ~ 18597498 (+)
G777455 NA non-coding downstream 22793 18609202 ~ 18609603 (+)
G777464 NA non-coding downstream 33976 18620385 ~ 18620622 (+)
G777469 NA non-coding downstream 41665 18628074 ~ 18628277 (+)
G777471 NA non-coding downstream 44745 18631154 ~ 18631362 (+)
G777396 NA other upstream 76260 18499614 ~ 18500018 (+)
G777165 NA other upstream 467796 18108019 ~ 18108482 (+)
G777113 NA other upstream 570610 18003267 ~ 18005668 (+)
G777111 NA other upstream 574096 18001889 ~ 18002182 (+)
G776818 LOC106600668 other upstream 917133 17658197 ~ 17659145 (+)
LOC110531694 LOC106577663 other downstream 1231279 19817663 ~ 19824606 (+)
LOC110531697 NA other downstream 1289859 19876221 ~ 19914138 (+)
LOC110531703 LOC106577651 other downstream 1423107 20009183 ~ 20090543 (+)
G779291 chd3 other downstream 1453202 20039611 ~ 20040283 (+)

Expression


Co-expression Network