XLOC_026988


Basic Information

Item Value
gene id XLOC_026988
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 1983663 ~ 1986858 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00057523
TTCAtcatttgagtttattttctcaTGAAGACAAACGGTCAAGCACACAATTGATCAGAGTCGTTTGACTGAAGGAGCCGGACCGACACGTTTGACAGCAAACATGAAGACAAAAAGCTGAGCAGAAATCCAGCTCAGCCGCTCACCGACAAGCAAACATGCAGCAGTTTCAAACACTTTCAGTAGGGGACGcttttagcattaaaaaaaaacctcattTTACTGCAACCCTGCTGTTTAAACCCAATACAGCGGCATCGCGTTAGTATTTTAGCACTAAAACATGTCTGACATGTTCGAGATTGTAAAGATCACACTGGCAGTAGAAGCTTCATCTGAAACTCAGCTTGGCTCAACGCTGCAACAGAATCCGCTTTTTAGTCTCTGGCTTGTTTTCCAGAGTTAAAGCAATACGTGTGCTTAAAGCTGAAGTTTGTTAAGTCCACCATGAAAATAAAAGGTAATCTGGCTTTTTATTTATCAGAAAGTCAATGTTTAATGCCGACTTATTTTCCTAAAAACTAAGACTTTGTATTGACAAACTCAGAGTTAAAGAAATAGAAGAGTAACAAGTCACCACCCTGATTTGACCAAGTAGGACATGatcctttgtttgttttattgctgagctacaaaaatgCGAGCTtgaattaaaagttttaattaaattcagatttatttaaatgttcattgtgttataaatggaacattgtaataagttaattataaaatgtagCCTAAAACAATTAATGTAGCTGTAAATTACCCACGGCAGCTTTgacatacagtttgatatatttagctttggcccacagccctcagTTTGTTTTTGGCCCCTCATAGAAAACAGTTTGGGCACTGCTGGTATAAATCAAAACGTACTCTTTTGCAAAAGTATAAACTTTAATTCATTTTACAAAAACGATTCATCAATTCCCTTTTCAAGTGAATGCATCTTTCATTTAAGAGTTTTATTTGTGCTGGAAAACAAGACTAAAGGCATAAAAGCGGATcctatttttttgcagtgaattaGGAAGGGTTGCCATTATTAAGACATCGAGGTGTTGGACTCTAGTATAAAAACGGCTGCGTGTTTCATCTCTGGAATgatatttagtgtgtgtgtgcttgatgaAAACAAAGACAATCTACAGCCATCTGTGCACTACTGCTAAAGGAAGACGAGCGGACGGGAAGGtcaatactgtgtgtgtgtgccagacaTACAAAAGAGCAGACCACGTCTTACAAACAGCTAAAAATACAATTTGGCAAACAGACCACCAGGGGGCGGTGTAGAAAAATCAAAGTCCGATTGATCGCTTGTAAAACCGTATGAAAGTCACATCTGAAAGTGGAATATCAGACCTCAAGTTTATATTTTGACCCACTGGCGATTGGTAAAACAGTATAAATACACACGTTTTGGTTCGTCTCACTCATTTAAACGCTACAGAAACTGAGCTGAGGTGAAACTGCTGATGAGAAACCAATTAAGATGCTGCATAGACCAGACTAAATCAACCATCCCACATCAACAAAAACACCGCAGGAGTGTATAGTGAAGTGTACACTACAATTGAAGCACACCATAGTAAAGTGTGTTAATGAATGTAAATATAGTAAACtgaaaatctgtcataaacattgTAGTATACTgtggttttactacagtaaaactgtggtgtattgtaggaTAATATACACTACAGCTGTAGAATACTAGAgcattgggtcatttgtttatattattattgttcttgtgataccatagcaactgtagaattactttttttttctcttcactttTCGCTTTTCTTCAAAAAATAATGGGAAGCCCTCAGTCGTTTCTGCTAATAGACGCCTCTGACCAGCCTTTTGATTCAGCCTCGCAAatatacatttgtacattttttggTATGCATGTCATCTGAAAAGGACTATTTATATACCTTAACTATTTACAGACCGACGGACCTCACAGAAATATCTTCATCCAATGCTCATGGAAAGAGTCTGACCCTAAACCCAAAGTGCAGAGAGAAAAGCTAATGAACATAAATCATTAGATCCTGTCATAATTCACTCTTAAATCATCAAAACCACtacatgtgaaagagaaaatatgcatattatattcatttaaaactgTGTTTCTCAACCAGTTTCCTAGAGGAGCACCAGATCTGCACATTTTACATGTCTCCTTAATTAAGCACACCTCattcagatcatcagcagagactgaaagacctgtaatgggtttgACAGACTATCACAATCACCAGCGCTGGTGAACACACTGAtcacataggactacaaatctgctgtatatgtgtgtgtgtgtaatcagtccatgagcagcatcagctgtgggagtgtaatcagtggagacttggagcaggtgtgtgtgtgtgttgcatgactggaccATGTAGTCCATATAAGAGCAGATTTGTAGTCGTTTGTGATcagtgtgtttaccagcgatctgtaaggattagatcactggtgattgtgacagacgaaggagacatccaaaacatgcagtgttggtgatcttccaggaacgtggttgagaaacactgatttaaaattaCACATAATTAAATTAGGTTTAATTCAAAATTAACAATCATTTaagaaacacatttttaatatcattattttaagaattaatcaataataatttttaaacaataattaaattttaataaattaaacaacttaattagtttaatttattaaacaataaataaataaattaatcatctAAATTCCATTTAAATGCAATAATGACAAAATTACACTcaaatttacatatttaaaatgtatatatacatatattatcaATTAAATGATTGAGCTAATTTA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00057523 True 2877 lncRNA 0.36 2 1983663 1986858

Neighbor

gene id symbol gene type direction distance location
XLOC_026987 NA coding upstream 8769 1950010 ~ 1974894 (+)
XLOC_026986 NA coding upstream 30664 1936477 ~ 1952999 (+)
XLOC_026985 NA coding upstream 117213 1865560 ~ 1866450 (+)
XLOC_026984 NA coding upstream 121151 1857483 ~ 1862512 (+)
XLOC_026983 NA coding upstream 131009 1845630 ~ 1852654 (+)
XLOC_026989 yeats4 coding downstream 72834 2059692 ~ 2062435 (+)
XLOC_026990 frs2a coding downstream 105825 2092683 ~ 2099581 (+)
XLOC_026991 cmah coding downstream 241896 2228754 ~ 2250264 (+)
XLOC_026992 glipr1a coding downstream 265265 2252123 ~ 2258796 (+)
XLOC_026993 si:ch73-89b15.3 coding downstream 280783 2267641 ~ 2290268 (+)
XLOC_026994 NA non-coding downstream 358790 2345648 ~ 2349381 (+)
XLOC_026995 NA non-coding downstream 365914 2352772 ~ 2355189 (+)
XLOC_026997 BX072538.1 non-coding downstream 595058 2581916 ~ 2582031 (+)
XLOC_026998 NA non-coding downstream 601299 2588157 ~ 2588403 (+)
XLOC_027002 NA non-coding downstream 915489 2902347 ~ 2904041 (+)

Expression


Co-expression Network