G777471


Basic Information

Item Value
gene id G777471
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 18631154 ~ 18631362 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU885898
GGTCAGACTTGATTAGAACGTCTTGTCTAACTAGAGATGTAGTTACACTGTAACCACCAAACCATCAACACACTAAGCAGCTACAGTTTGGAACACTATAGGAACATCACACAGATAGACCGATGGATGGATTAAAGGAGCATTATGTCGAATTTTTGCATTGTAATGTCATAAAATGTCCATAATATATCTGCAGTAATAGTGAAATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU885898 True 209 lncRNA 0.37 1 18631154 18631362

Neighbor

gene id symbol gene type direction distance location
LOC110531660 LOC106608810 coding upstream 310395 18301368 ~ 18320759 (+)
LOC110531658 LOC106577765 coding upstream 374751 18250932 ~ 18256403 (+)
LOC110531656 pop7 coding upstream 440712 18187738 ~ 18190442 (+)
LOC110531644 mettl3 coding upstream 1284903 17339272 ~ 17346251 (+)
LOC110532942 LOC106577806 coding upstream 1325525 17292470 ~ 17305629 (+)
LOC110531663 LOC106577697 coding downstream 9293 18640655 ~ 18648675 (+)
LOC110531664 LOC106577696 coding downstream 24815 18656177 ~ 18673318 (+)
LOC110531665 LOC106577695 coding downstream 87003 18718365 ~ 18833482 (+)
LOC118966177 NA coding downstream 213914 18845276 ~ 18846593 (+)
chrnb1l LOC106577752 coding downstream 280388 18911750 ~ 18928236 (+)
G777469 NA non-coding upstream 2877 18628074 ~ 18628277 (+)
G777464 NA non-coding upstream 10532 18620385 ~ 18620622 (+)
G777455 NA non-coding upstream 21551 18609202 ~ 18609603 (+)
G777448 NA non-coding upstream 33656 18593619 ~ 18597498 (+)
G777434 NA non-coding upstream 44745 18576278 ~ 18586409 (+)
G777474 NA non-coding downstream 1908 18633270 ~ 18633720 (+)
G777498 NA non-coding downstream 32381 18663743 ~ 18722039 (+)
G777587 NA non-coding downstream 165336 18796698 ~ 18796914 (+)
G777591 NA non-coding downstream 168749 18800111 ~ 18800372 (+)
G777596 NA non-coding downstream 175648 18807010 ~ 18807243 (+)
G777396 NA other upstream 131136 18499614 ~ 18500018 (+)
G777165 NA other upstream 522672 18108019 ~ 18108482 (+)
G777113 NA other upstream 625486 18003267 ~ 18005668 (+)
G777111 NA other upstream 628972 18001889 ~ 18002182 (+)
G776818 LOC106600668 other upstream 972009 17658197 ~ 17659145 (+)
LOC110531694 LOC106577663 other downstream 1186326 19817663 ~ 19824606 (+)
LOC110531697 NA other downstream 1244906 19876221 ~ 19914138 (+)
LOC110531703 LOC106577651 other downstream 1378154 20009183 ~ 20090543 (+)
G779291 chd3 other downstream 1408249 20039611 ~ 20040283 (+)

Expression


Co-expression Network