G778455


Basic Information

Item Value
gene id G778455
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 18715780 ~ 18736719 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU887011
TTGCAACACTGGGGCCCCCACATGAGTGGCCTTGCGTGCCTCCAACTCAACCATCAAGTTTGTAGACAACacgacagtagtaggcttgattaccaacagcgatgagacagccttcagggaggaggtgagggctctgggagtgtggtgccaggtaaaTAACCTCTTACTCAACATCAAccaaactaaggagatgatcgtggacaggaaacagcagagggagcacacccctagCCACATCGATGCCACCGCAGTGGAataggtggaaagcttcaagttcctctgcgtacacatcactgacaaactgaaatggtccacccacacagacagtgtggtgaagaaggcacaacagcgcctcttcaacctcaggaggctaaagaaatttggcttgtcacctaaaaccctcacaaacttttacagatgcacaattgagagtatcctgtcgggctgtatcaccgcctggtacggcaactgcactgcccagaACTGCAAatttctccagagggtggtgcagtctgcccaacgcattaccgggggcaaactacctgccctccaggacacctacagcacctgatgtcacaggaaggccaaaatgatcatcaaggacaacaaccacccgagccactacctgttcaccccgttaccaTCAAGAaagcgagatcagtacaggtgcatcaaagctgggaccgagaaactgaaaaacagcttatatc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU887011 True 710 lncRNA 0.51 2 18715780 18736719

Neighbor

gene id symbol gene type direction distance location
LOC110531661 LOC105020576 coding downstream 109558 18331006 ~ 18606222 (-)
LOC110531659 LOC106577767 coding downstream 416963 18283728 ~ 18298817 (-)
LOC110532944 NA coding downstream 470685 18236222 ~ 18245095 (-)
LOC110531655 LOC106577763 coding downstream 514836 18190851 ~ 18200944 (-)
LOC110531653 LOC106577760 coding downstream 527204 18154842 ~ 18188576 (-)
LOC110532946 NA coding upstream 251103 18987822 ~ 18989644 (-)
LOC110531673 LOC106577689 coding upstream 273373 19010092 ~ 19017404 (-)
LOC110531672 LOC106577688 coding upstream 280827 19017546 ~ 19047473 (-)
LOC118966012 NA coding upstream 329972 19066691 ~ 19070212 (-)
tifa LOC106577687 coding upstream 347313 19084032 ~ 19085999 (-)
G778411 NA non-coding downstream 4025 18648384 ~ 18711755 (-)
G778401 NA non-coding downstream 89071 18626497 ~ 18626709 (-)
G778393 NA non-coding downstream 106447 18609121 ~ 18609333 (-)
G778380 NA non-coding downstream 128040 18587273 ~ 18587740 (-)
G778321 NA non-coding downstream 217412 18497714 ~ 18498368 (-)
G778574 NA non-coding upstream 157617 18894336 ~ 18894635 (-)
G778575 NA non-coding upstream 158542 18895261 ~ 18895558 (-)
G778584 NA non-coding upstream 179581 18916300 ~ 18916609 (-)
G778626 NA non-coding upstream 234245 18970964 ~ 18981060 (-)
G778666 NA non-coding upstream 321401 19058120 ~ 19058420 (-)
G778216 NA other downstream 357677 18355441 ~ 18358103 (-)
G776822 NA other downstream 1055297 17659690 ~ 17660483 (-)
G776820 NA other downstream 1056377 17659016 ~ 17659403 (-)
G776814 LOC106600668 other downstream 1059455 17655988 ~ 17656325 (-)
G776812 LOC106566110 other downstream 1059800 17655594 ~ 17655980 (-)
G780209 NA other upstream 1080972 19817691 ~ 19824571 (-)
LOC110531704 LOC106608762 other upstream 1335277 20022194 ~ 20075490 (-)
LOC110531717 LOC106577635 other upstream 1565359 20302051 ~ 20324316 (-)
LOC110531730 adgrl3 other upstream 2194241 20930960 ~ 21272646 (-)
G782003 NA other upstream 3038999 21775718 ~ 21776210 (-)

Expression


Co-expression Network