G777599


Basic Information

Item Value
gene id G777599
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 18810187 ~ 18810457 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU886043
CAGCTCCCCAGTACTGCAGCATAGAGTGCAGAAGAAATATCATTACACGGAGAGAAGCTCAAAACTGTAACTTCAACTTTCTAGACTTTTCCCTGTAAGTTAAAACTATCACTACTCTTTACTGTGGCAATTATGGtcgaatcaatgcaatattagccactttcaatgtgaCATACCAAagcaaaacaaactatgcaagagattttgtggTAGGCAGAACACATCttagtaggattctattgcacaTAACGTGGtggtactctacacagac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU886043 True 271 lncRNA 0.39 1 18810187 18810457

Neighbor

gene id symbol gene type direction distance location
LOC110531664 LOC106577696 coding upstream 136869 18656177 ~ 18673318 (+)
LOC110531663 LOC106577697 coding upstream 161512 18640655 ~ 18648675 (+)
LOC110531660 LOC106608810 coding upstream 489428 18301368 ~ 18320759 (+)
LOC110531658 LOC106577765 coding upstream 553784 18250932 ~ 18256403 (+)
LOC110531656 pop7 coding upstream 619745 18187738 ~ 18190442 (+)
LOC118966177 NA coding downstream 34819 18845276 ~ 18846593 (+)
chrnb1l LOC106577752 coding downstream 101293 18911750 ~ 18928236 (+)
LOC110531666 LOC106577694 coding downstream 128138 18938595 ~ 18950268 (+)
LOC110531667 NA coding downstream 150880 18961337 ~ 18963380 (+)
LOC110531669 LOC106577692 coding downstream 166537 18976994 ~ 18982679 (+)
G777596 NA non-coding upstream 2944 18807010 ~ 18807243 (+)
G777591 NA non-coding upstream 9815 18800111 ~ 18800372 (+)
G777587 NA non-coding upstream 13273 18796698 ~ 18796914 (+)
G777498 NA non-coding upstream 88148 18663743 ~ 18722039 (+)
G777474 NA non-coding upstream 176467 18633270 ~ 18633720 (+)
G777601 NA non-coding downstream 439 18810896 ~ 18811237 (+)
G777603 NA non-coding downstream 3268 18813725 ~ 18813955 (+)
G777643 NA non-coding downstream 64636 18875093 ~ 18875295 (+)
G777658 NA non-coding downstream 98160 18908617 ~ 18911505 (+)
G777396 NA other upstream 310169 18499614 ~ 18500018 (+)
G777165 NA other upstream 701705 18108019 ~ 18108482 (+)
G777113 NA other upstream 804519 18003267 ~ 18005668 (+)
G777111 NA other upstream 808005 18001889 ~ 18002182 (+)
LOC110531694 LOC106577663 other downstream 1007231 19817663 ~ 19824606 (+)
LOC110531697 NA other downstream 1065811 19876221 ~ 19914138 (+)
LOC110531703 LOC106577651 other downstream 1199059 20009183 ~ 20090543 (+)
G779291 chd3 other downstream 1229154 20039611 ~ 20040283 (+)
LOC110531706 naa38 other downstream 1268979 20079382 ~ 20082084 (+)

Expression


Co-expression Network