XLOC_026990 (frs2a)


Basic Information

Item Value
gene id XLOC_026990
gene name frs2a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 2092683 ~ 2099581 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00053259
GATGTCACAGGGGTCCAGTGGTGTGTTAAAGGCGCAATGGGGAGCTGCTGTAGCTGTCCCGATAAAGAGATCATCCCTGACAACCATCACAACAAATTCAAGgtgataAACGTGGATGATGATGGTAATGAGCTGGGCTCAGGTGTGATGGAGTTAACAGAGGAAGAGCTCATTCTGCACACGCGCAAACGAGACGCCGTCAAGTGGCCGTATCTCTGTCTGCGCCGCTATGGGTACGACTCAAACCTCTTCTCCTTCGAGAGTGGCCGGCGCTGCCAGACTGGACAAGGGATATTTGCGTTCAAATGCGCTCGGGCCGAGGAGATCTTCAACATGCTGCAGGACATCATGCACAACAACAGCATCAGTGTGGTGGAGGAGCCTGTGCTGGAGCCTGAGCTTCCTGCGACGCCACACACACCCACCACTCCAGGTTACTCTGTCCCGACGGTGGCCAATGGGATCAGCCGCTATCCATTGTTTGACGCCTCCTCGCGGCCGTCCAGTCGCCATCCTTCTGTGGGCAGCACTAGACTACCATCAGTAGGAGAAGAGTCGACACATCCACTGCTGCTCAACGACGAaacgGTACACACATACGTCAACACTACAGGACTGCAGGAGGAGCGGCGCTGTCGCAGCACAGGCCACACCCCTCTGGAGCCTGAGACGTCCAATCACGAGAGCGCAGTGCCAGCGTCGCCCAATGAGCAGGAGCCTTGTGTGGTGCTGGAGCCTGAGAGTGTGAAGTTTGTTTTAGGCCCGACGCCTGTGCAgagacagagacagcagcagGAGACGGGCGAGGAGGCGACTAATTCTGAACACACTTCATACACTCCTCCTGTTAAGACAGTAAATGGCAACGCAGGCCTTATGGCGGACTGTGACACCGGCTACGACAGCGATGAGCGCAAAGAGACATCATGTGAGCATCATAACGGCATTTCAACAGGAGCCAGACGCATCAGACCCCCCGTCCCGCTGCCAGATGCACACAATGCTAACAATTCAGCCCAGCGGCGGACAGCGCTACTAAACTATGAGAATCTGCCTGCATTGCCGCCTGTCTGGGAGATGCGCAAACCCGAGGAGGATGAACTCAAATCTCCATCGCTGAACGGATTTCATTCACTCGACCCGCAGCATAATTACGTCAATACTGAGAATGTGACGGTGCCGCTTAGTGCACATAAACACAACTCTCAGCCGAGCGTTTTTAACTTTGACCTGCGGCGGCTTGGAGTGGGCGACCCGCTCCGCCAGCTGAACTACATTGAGGTGGAAATGGACAAAGTGTCGGATTCTAGCGGGCCTCATACGCCTAAAACACCCACTACACCTCTGCCGGCCACTCCTACACGGAGAACTGAGCTGTACGCTGTTATTGATATTGAACGCACTGCTGCCATGTCCAGCCTGCAGAAAGCACAGCCACGGGACGATGGGACGTCCAGAAAAACACGACACAACAGCACCGACCTGCCCATGTGACCCGCACTGACAACAATGTACAAATCAGTTTATACATCAGTTTATCTC

Function

symbol description
frs2a Predicted to enable fibroblast growth factor receptor binding activity and transmembrane receptor protein tyrosine kinase adaptor activity. Predicted to be involved in fibroblast growth factor receptor signaling pathway. Predicted to be located in membrane. Predicted to be active in cell-cell junction and cytoplasm. Orthologous to human FRS2 (fibroblast growth factor receptor substrate 2).

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-060503-462 Predicted to enable fibroblast growth factor receptor binding activity and transmembrane receptor protein tyrosine kinase adaptor activity. Predicted to be involved in fibroblast growth factor receptor signaling pathway. Predicted to be located in membrane. Predicted to be active in cell-cell junction and cytoplasm. Orthologous to human FRS2 (fibroblast growth factor receptor substrate 2).

Ensembl:

ensembl_id ENSDARG00000045873

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00053259 True 1542 mRNA 0.55 6 2092683 2099581

Neighbor

gene id symbol gene type direction distance location
XLOC_026989 yeats4 coding upstream 30248 2059692 ~ 2062435 (+)
XLOC_026988 NA coding upstream 105825 1983663 ~ 1986858 (+)
XLOC_026987 NA coding upstream 117789 1950010 ~ 1974894 (+)
XLOC_026986 NA coding upstream 139684 1936477 ~ 1952999 (+)
XLOC_026985 NA coding upstream 226233 1865560 ~ 1866450 (+)
XLOC_026991 cmah coding downstream 129173 2228754 ~ 2250264 (+)
XLOC_026992 glipr1a coding downstream 152542 2252123 ~ 2258796 (+)
XLOC_026993 si:ch73-89b15.3 coding downstream 168060 2267641 ~ 2290268 (+)
XLOC_026994 NA coding downstream 246067 2345648 ~ 2349381 (+)
XLOC_026995 NA coding downstream 253191 2352772 ~ 2355189 (+)
XLOC_026984 NA non-coding upstream 230171 1857483 ~ 1862512 (+)
XLOC_026997 BX072538.1 non-coding downstream 482335 2581916 ~ 2582031 (+)
XLOC_026998 NA non-coding downstream 488576 2588157 ~ 2588403 (+)
XLOC_027002 NA non-coding downstream 802766 2902347 ~ 2904041 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000066_02144721_02147772 FRS2A, FRS2 coding CI01000066 null 2144721 ~ 2149180 (+)