G778626


Basic Information

Item Value
gene id G778626
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 18970964 ~ 18981060 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU887194
TGTTTAAATAATACAACATCTTCAACAATAATTATGGCCTAGAACTATAaagcccagagtttttcctggtcagatcCTGTGATCAGGAAAAACTCTAGACATAAGGCATGCCAAGCCTTATGACTCGTGTTCTTCTATACATcccatgtacatactacctcaattggcccgaccaaccagtgctccggcacattggctaaccgggctatctgcattgtgtcccaccacccaccacccgccaacccctcttttacactaccgCTACTCTcagttcatcatatatgcatagtcactttcaccatatctacatgtacatactacttcaatcagcccgactaaccagtgcctgtatgtagcctcgctaatGTTATAGCTTCGTTACctgaggtgtggactcgagtcacatgacttgaactcgagtcagactcgagtcacaaatatgctgacttgcaactcgactttgactttaacaccaatgactcgtgacttgacttggacttgagccttatgactcaacctgacttgataccctccccaagcccaaatataaaaaatgatgctattaaaaaaagtgtgcagcgcatcaactcttcatttaacggattacagtttgaatcggacagcagccaatcaagttgtgccagctgagaaaaagttgtgcgtggcagtgcagaggaaagTTGGtaggtgaattcagatggagcccttggagaGATGATACCCAAAATGATTATTTTCGGATAGAAAAACTAcactgtatcaacaaaaaacggattgcaacttgcaCAACATGCGGGAAGGAAATTACAGAAGGAGgcgcaacaatttccaactttgttcgacatttgaagctgcacaaagaatgGGTTAAGACGATGGGAGAGGAAAGAGCAGGGGTGCAGCTTTTGGTCCCGGCCAGGACAGGACGGCCCCCACTCCGACATCTGAGGCGTCGACCTCCACCACAAACCGACGGGATGGGTCCGGATGGACTAAGATGGGGGCTGTAGTGAATCGACGTTTGACGTCCGAGAACACCTGGTCAGCTGCTGGCGACCATGTGAAgggaaccttgggagaggtgagtgctgagATGAGGGAAGGAAACCTCGGATGAAGTGGCGGTAGAAGTTAGAAACCCCAGGAAATgttgcagctgcactctggatgTGGGTTGAGGCC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106604999

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU887194 True 1182 lncRNA 0.47 2 18970964 18981060

Neighbor

gene id symbol gene type direction distance location
LOC110531661 LOC105020576 coding downstream 364742 18331006 ~ 18606222 (-)
LOC110531659 LOC106577767 coding downstream 672147 18283728 ~ 18298817 (-)
LOC110532944 NA coding downstream 725869 18236222 ~ 18245095 (-)
LOC110531655 LOC106577763 coding downstream 770020 18190851 ~ 18200944 (-)
LOC110531653 LOC106577760 coding downstream 782388 18154842 ~ 18188576 (-)
LOC110532946 NA coding upstream 6762 18987822 ~ 18989644 (-)
LOC110531673 LOC106577689 coding upstream 29032 19010092 ~ 19017404 (-)
LOC110531672 LOC106577688 coding upstream 36486 19017546 ~ 19047473 (-)
LOC118966012 NA coding upstream 85631 19066691 ~ 19070212 (-)
tifa LOC106577687 coding upstream 102972 19084032 ~ 19085999 (-)
G778584 NA non-coding downstream 54355 18916300 ~ 18916609 (-)
G778575 NA non-coding downstream 75406 18895261 ~ 18895558 (-)
G778574 NA non-coding downstream 76329 18894336 ~ 18894635 (-)
G778455 NA non-coding downstream 234245 18715780 ~ 18736719 (-)
G778411 NA non-coding downstream 259209 18648384 ~ 18711755 (-)
G778666 NA non-coding upstream 77060 19058120 ~ 19058420 (-)
G778678 NA non-coding upstream 95058 19076118 ~ 19076772 (-)
G778679 NA non-coding upstream 96005 19077065 ~ 19077316 (-)
G778682 NA non-coding upstream 98045 19079105 ~ 19079319 (-)
G778216 NA other downstream 612861 18355441 ~ 18358103 (-)
G776822 NA other downstream 1310481 17659690 ~ 17660483 (-)
G776820 NA other downstream 1311561 17659016 ~ 17659403 (-)
G776814 LOC106600668 other downstream 1314639 17655988 ~ 17656325 (-)
G776812 LOC106566110 other downstream 1314984 17655594 ~ 17655980 (-)
G780209 NA other upstream 836631 19817691 ~ 19824571 (-)
LOC110531704 LOC106608762 other upstream 1090936 20022194 ~ 20075490 (-)
LOC110531717 LOC106577635 other upstream 1321018 20302051 ~ 20324316 (-)
LOC110531730 adgrl3 other upstream 1949900 20930960 ~ 21272646 (-)
G782003 NA other upstream 2794658 21775718 ~ 21776210 (-)

Expression


Co-expression Network