G778678


Basic Information

Item Value
gene id G778678
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 19076118 ~ 19076772 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU887247
GACACAGAAAGACATTCAGGGAACTCTTATAAAACCATGTAATTCAGTAGTACAGCTATACAAACCAATACAACCATTTACAGTATAGGTTACAATACATATGAATGTTTAATGAATTCTACTTTTCTAACTTACCAGGGGCCTAGAACTTCAAACATAGGGGTGCATTCAATAGGAACCAAAAGGGCCAAAACAGAGGGGGACTCAGTAGCATTAATGTGTCCATCAAGAAATGCTTGTTTTCACAGCAAAATCTTGTGCTTGTGCAAACTAAATGAATAAACCCCACAACAATATGTATCTGCTGACCTTAAGACTGTGTCCCTACTTTCTTATGGACGGAATTATCTATAAAATAAATCTGCACCTGACAATGACACCTTACATTTCCACAACCAAGATCATGGTTATATTTAAAAGGGCAATCTGGTATTCAAACAAAGACCCAGCCACTTGTTGAGCTGAGGCTGGAGAACTGTATATGACTAACTACTCTGAAATTCATAGACTGAGCCTTTGATAGATGGACTGACCATCTATAAGCTCAAAATGATAGTTGACCATGTTCTAAAGCTATAGTGTTTTCACAATTAGATTACTTAAACAATGGAGTAATaggtttatacagtgccttgcgaaagtattcggccccctt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU887247 True 655 lncRNA 0.37 1 19076118 19076772

Neighbor

gene id symbol gene type direction distance location
LOC118966012 NA coding downstream 5906 19066691 ~ 19070212 (-)
LOC110531672 LOC106577688 coding downstream 28645 19017546 ~ 19047473 (-)
LOC110531673 LOC106577689 coding downstream 58714 19010092 ~ 19017404 (-)
LOC110532946 NA coding downstream 86474 18987822 ~ 18989644 (-)
LOC110531661 LOC105020576 coding downstream 469896 18331006 ~ 18606222 (-)
tifa LOC106577687 coding upstream 7260 19084032 ~ 19085999 (-)
nitr2 nitr2 coding upstream 42728 19119500 ~ 19124018 (-)
LOC110532949 nitr3 coding upstream 71330 19148102 ~ 19156589 (-)
nitr3 nitr3 coding upstream 95863 19172635 ~ 19174378 (-)
LOC110512425 LOC106577746 coding upstream 101273 19178045 ~ 19179798 (-)
G778666 NA non-coding downstream 17698 19058120 ~ 19058420 (-)
G778626 NA non-coding downstream 95058 18970964 ~ 18981060 (-)
G778584 NA non-coding downstream 159509 18916300 ~ 18916609 (-)
G778575 NA non-coding downstream 180560 18895261 ~ 18895558 (-)
G778679 NA non-coding upstream 293 19077065 ~ 19077316 (-)
G778682 NA non-coding upstream 2333 19079105 ~ 19079319 (-)
G778694 NA non-coding upstream 32106 19108878 ~ 19109250 (-)
G778696 NA non-coding upstream 34928 19111700 ~ 19111989 (-)
G778697 NA non-coding upstream 35889 19112661 ~ 19112927 (-)
G778216 NA other downstream 718015 18355441 ~ 18358103 (-)
G776822 NA other downstream 1415635 17659690 ~ 17660483 (-)
G776820 NA other downstream 1416715 17659016 ~ 17659403 (-)
G776814 LOC106600668 other downstream 1419793 17655988 ~ 17656325 (-)
G776812 LOC106566110 other downstream 1420138 17655594 ~ 17655980 (-)
G780209 NA other upstream 740919 19817691 ~ 19824571 (-)
LOC110531704 LOC106608762 other upstream 995224 20022194 ~ 20075490 (-)
LOC110531717 LOC106577635 other upstream 1225306 20302051 ~ 20324316 (-)
LOC110531730 adgrl3 other upstream 1854188 20930960 ~ 21272646 (-)
G782003 NA other upstream 2698946 21775718 ~ 21776210 (-)

Expression


Co-expression Network