XLOC_026993 (si:ch73-89b15.3)


Basic Information

Item Value
gene id XLOC_026993
gene name si:ch73-89b15.3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 2267641 ~ 2290268 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00053264
ATGCTGTCCTACAAGTGTgtgttgagtttgtgtgtgtttttcctcaCTGACTCCAGATCAGATGCTCAGATCAATGTATCTGCTGTACTGCGCAGTGTTTCTCCATCAGCACTGACCCCAGGTCAGCCCTCCAGAACAGCAGATGGACCCAAACTGCTTATTAAAGATGGACTGGTACAGGGCCTGCTGCTGGAcaagtcttatgtgttttatggGATCCCGTTTGCTGATCCTCCAGTCGGGACGTCCCGTTGGAAAGCTCCGAGACCTGTTACTCCATGGAAAGGGGTATATGATGCCTCCTTTCCCAGAGCGGCGTGTATGCAGGCCTGCATCGGCCCCATTGCTGATGACTGCCCCAAAAAGGTGAGTGAGGACTGCCTGTACCTGAATGTGTTTGTTCCTCTGAGTGTGGATCTGGCGACTCCGCTGCTGCAGCCGCTGCCGGTGATGCTGTGGATCCACGGTGGGGATTTCATCGCAGGATCCGCATCCAAACCGCTGTACGACGGCAGATTCATCAGCAACTACACACAGACGGTGATCGTGAGCATCGCATATCGCCTGGGAGCCTTCGGTTTTCTAGTATCGGGAAAAGACCCAAAGTCGACGGCAGTTGGCAATTATGGCATTCTGGACCAGCAGGCAGCGCTGATCTGGGTGCAGCAGAACATTGCAGCGTTTGGAGGAGACCCGAGCAGAGTAACTATTTTTGGTGAAAGCGCCGGCGCTCAATCAGTCAGTTTACATCTGATGATCCAGAGCAGCAAACCTCTCTTTAAACAGGCGGTTTTCCAGAGTTTACCTTTCTCTATTCCTCTCAAAACACGACGCGAGTCTCTGAAGCTGGGAAAACACTTCGCCAAAGCAGCAAACTGTTCACTGGAGGACATGAAGTGTCTTCAGTCTCTGAGTGCTGAAGATGTGCTGCATGCCCAGATCAAGACCAGCTCAAAGTTGGTGAACCCATTCCGCTTTCTGGAGGTGTTTGAGATCTGGGGGCCGTTCATTGATGGCGAGCTGATCAAGGAGCAGGCGGTGAGCGCCTTCCAGAAAGGACACTGGCAGAAGGAGAAACCTGTGCTGCTTGgAACGACTTCAGAGGAAGGTGTGATTTTTGTGTATGGTGTCTTCAAGAAGCCCGTATCCGCGGTCGAGTGCACTATCTACACAACGGCCATCTTTAAACAACACGCCATCAAAATCCTGCGCAAATATTTACCGCTCTACAGCGACGCCGACCGCAGGGACATGCTAGCACAGATCGTGACTGATTACATCTTCTGGTGTCCATCCCGGAGGTCTGCTCGGGCCGCTGTTTTGTCCGGTAGCTCTGCCTGGATGTATGTGTTTGATCAGGTGTCCAGCGACCCACGCGTGTGGTCAGGTGTGTCCTCCTGTTACCAGCGTGTGTGTCACGGAGCGGAGCTTCCATTTGTGTTTGACTCAGCGTCGGTGGCGAACTTCAGCATGACCCCTGCTGAGAAACTGCTCTCCAACCGGGTGCTGTGCTACTGGGGCGGATTTGCTCACACCGGAAACCCCACCGGAGAGACCCGGAGACCATCGGACATCAGCGGGTTCTGCCGGCAGCAGCGGCCTCCGAGTTGGCCCTCATACACAGCCAACAGAGGCTGGATGATCATGAACCTGACCGCACATCCACACTCACAGGCCGGGTACGGAGAAGACATCTGCGACTTCTGGGACACTCTGGGCATCTACCCGTGA
>TCONS_00053265
CTGAGTGTGGATCTGGCGACTCCGCTGCTGCAGCCGCTGCCGGTGATGCTGTGGATCCACGGTGGGGATTTCATCGCAGGATCCGCATCCAAACCGCTGTACGACGGCAGATTCATCAGCAACTACACACAGACGGTGATCGTGAGCATCGCATATCGCCTGGGAGCCTTCGGTTTTCTAGTATCGGGAAAAGACCCAAAGTCGACGGCAGTTGGCAATTATGGCATTCTGGACCAGCAGGCAGCGCTGATCTGGGTGCAGCAGAACATTGCAGCGTTTGGAGGAGACCCGAGCAGAGTAACTATTTTTGGTGAAAGCGCCGGCGCTCAATCAGTCAGTTTACATCTGATGATCCAGAGCAGCAAACCTCTCTTTAAACAGGCGGTTTTCCAGAGTTTACCTTTCTCTATTCCTCTCAAAACACGACGCGAGTCTCTGAAGCTGGGAAAACACTTCGCCAAAGCAGCAAACTGTTCACTGGAGGACATGAAGTGTCTTCAGTCTCTGAGTGCTGAAGATGTGCTGCATGCCCAGATCAAGACCAGCTCAAAGTTGGTGAACCCATTCCGCTTTCTGGAGGTGTTTGAGATCTGGGGGCCGTTCATTGATGGCGAGCTGATCAAGGAGCAGGCGGTGAGCGCCTTCCAGAAAGGACACTGGCAGAAGGAGAAACCTGTGCTGCTTGgAACGACTTCAGAGGAAGGTGTGATTTTTGTGTATGGTGTCTTCAAGAAGCCCGTATCCGCGGTCGAGTGCACTATCTACACAACGGCCATCTTTAAACAACACGCCATCAAAATCCTGCGCAAATATTTACCGCTCTACAGCGACGCCGACCGCAGGGACATGCTAGCACAGATCGTGACTGATTACATCTTCTGGTGTCCATCCCGGAGGTCTGCTCGGGCCGCTGTTTTGTCCGGTAGCTCTGCCTGGATGTATGTGTTTGATCAGGTGTCCAGCGACCCACGCGTGTGGTCAGGTGTGTCCTCCTGTTACCAGCGTGTGTGTCACGGAGCGGAGCTTCCATTTGTGTTTGACTCAGCGTCGGTGGCGAACTTCAGCATGACCCCTGCTGAGAAACTGCTCTCCAACCGGGTGCTGTGCTACTGGGGCGGATTTGCTCACACCGGAAACCCCACCGGAGAGACCCGGAGACCATCGGACATCAGCGGGTTCTGCCGGCAGCAGCGGCCTCCGAGTTGGCCCTCATACACAGCCAACAGAGGCTGGATGATCATGAACCTGACCGCACATCCACACTCACAGGCCGGGTACGGAGAAGACATCTGCGACTTCTGGGACACTCTGGGCATCTACCCGTGACAAAGAAAATGGCATTAAACATAAGGAGTCAGATATCGCTATCGCCTGCTCTGCCGTCACAATGTTTGATTACTTCTGTTAAAATAAACAGCTGAAGCGG

Function

symbol description
si:ch73-89b15.3 Predicted to enable carboxylic ester hydrolase activity; mannosyl-oligosaccharide mannosidase activity; and phospholipase activity.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000053709

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00053264 False 1731 mRNA 0.54 8 2267641 2281430
TCONS_00053265 True 1426 mRNA 0.54 8 2269815 2290268

Neighbor

gene id symbol gene type direction distance location
XLOC_026992 glipr1a coding upstream 8845 2252123 ~ 2258796 (+)
XLOC_026991 cmah coding upstream 17377 2228754 ~ 2250264 (+)
XLOC_026990 frs2a coding upstream 168060 2092683 ~ 2099581 (+)
XLOC_026989 yeats4 coding upstream 205206 2059692 ~ 2062435 (+)
XLOC_026988 NA coding upstream 280783 1983663 ~ 1986858 (+)
XLOC_026994 NA coding downstream 55380 2345648 ~ 2349381 (+)
XLOC_026995 NA coding downstream 62504 2352772 ~ 2355189 (+)
XLOC_026996 zdhhc17 coding downstream 191778 2482046 ~ 2508577 (+)
XLOC_026997 BX072538.1 coding downstream 291648 2581916 ~ 2582031 (+)
XLOC_026998 NA coding downstream 297889 2588157 ~ 2588403 (+)
XLOC_026987 NA non-coding upstream 292747 1950010 ~ 1974894 (+)
XLOC_026986 NA non-coding upstream 314642 1936477 ~ 1952999 (+)
XLOC_026985 NA non-coding upstream 401191 1865560 ~ 1866450 (+)
XLOC_026984 NA non-coding upstream 405129 1857483 ~ 1862512 (+)
XLOC_027002 NA non-coding downstream 612079 2902347 ~ 2904041 (+)

Expression


Co-expression Network