Gene
RNA
| Item | Value |
|---|---|
| gene id | G780209 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 19817691 ~ 19824571 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| high affinity immunoglobulin epsilon receptor subunit gamma-like isoform X1 |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU888931 | False | 894 | lncRNA | 0.39 | 5 | 19817691 | 19824571 |
| TU888932 | True | 906 | TUCP | 0.40 | 5 | 19817691 | 19824571 |
19,812,000
19,813,000
19,814,000
19,815,000
19,816,000
19,817,000
19,818,000
19,819,000
19,820,000
19,821,000
19,822,000
19,823,000
19,824,000
19,825,000
19,826,000
19,827,000
19,828,000
19,829,000
19,830,000
NC_048573.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532957 | LOC106577671 | coding | downstream | 492959 | 19323732 ~ 19324732 (-) |
| LOC118966014 | LOC106577677 | coding | downstream | 506721 | 19310059 ~ 19310970 (-) |
| LOC110532955 | NA | coding | downstream | 524195 | 19292757 ~ 19293496 (-) |
| LOC110531676 | nitr3 | coding | downstream | 525334 | 19290034 ~ 19292357 (-) |
| LOC110532954 | LOC106577681 | coding | downstream | 556607 | 19259903 ~ 19261084 (-) |
| LOC110531695 | LOC106577660 | coding | upstream | 38212 | 19862783 ~ 19868337 (-) |
| LOC110531696 | LOC106577660 | coding | upstream | 44867 | 19869438 ~ 19872456 (-) |
| LOC110531700 | LOC106577652 | coding | upstream | 125276 | 19949847 ~ 19961244 (-) |
| LOC110531702 | LOC106577654 | coding | upstream | 142398 | 19966969 ~ 19972714 (-) |
| LOC110531704 | LOC106608762 | coding | upstream | 197623 | 20022194 ~ 20075490 (-) |
| G780179 | NA | non-coding | downstream | 10873 | 19804358 ~ 19806818 (-) |
| G780185 | NA | non-coding | downstream | 40570 | 19775420 ~ 19777121 (-) |
| G780175 | NA | non-coding | downstream | 53470 | 19763928 ~ 19764221 (-) |
| G780158 | NA | non-coding | downstream | 80204 | 19731718 ~ 19737487 (-) |
| G780140 | NA | non-coding | downstream | 116210 | 19692639 ~ 19701481 (-) |
| G780218 | NA | non-coding | upstream | 9682 | 19834253 ~ 19834485 (-) |
| G780232 | LOC106577661 | non-coding | upstream | 26540 | 19851111 ~ 19852812 (-) |
| G780277 | NA | non-coding | upstream | 110997 | 19935568 ~ 19939204 (-) |
| G780294 | NA | non-coding | upstream | 115250 | 19939821 ~ 19940043 (-) |
| G780295 | NA | non-coding | upstream | 115543 | 19940114 ~ 19940408 (-) |
| G778216 | NA | other | downstream | 1459588 | 18355441 ~ 18358103 (-) |
| G776822 | NA | other | downstream | 2157208 | 17659690 ~ 17660483 (-) |
| G776820 | NA | other | downstream | 2158288 | 17659016 ~ 17659403 (-) |
| G776814 | LOC106600668 | other | downstream | 2161366 | 17655988 ~ 17656325 (-) |
| G776812 | LOC106566110 | other | downstream | 2161711 | 17655594 ~ 17655980 (-) |
| LOC110531717 | LOC106577635 | other | upstream | 477507 | 20302051 ~ 20324316 (-) |
| LOC110531730 | adgrl3 | other | upstream | 1106389 | 20930960 ~ 21272646 (-) |
| G782003 | NA | other | upstream | 1951147 | 21775718 ~ 21776210 (-) |
| G784602 | NA | other | upstream | 3912650 | 23737221 ~ 23739513 (-) |
