G779266


Basic Information

Item Value
gene id G779266
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 20001753 ~ 20002034 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU887893
cttagtccactctgttcataacagattttAGTTTTTGAAACCAATTTTTTTATTGAGATGAAATGTTTCATCGATAACAAAATGATCAGAATGCCAAAATCCATCtcattccatcttctcccacttccAGCCACTGGgtttcctctcatcaccatatttggtagtgagtggaaacgtcAACCGGaagcttcacatttatacatctggtgaaatatCTGGCTACAACTTAATATTCGGGAAGGgatttcttaatgttttgtacactcagtgtgtaaaGGCAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU887893 True 282 lncRNA 0.37 1 20001753 20002034

Neighbor

gene id symbol gene type direction distance location
LOC110533004 NA coding upstream 55231 19942675 ~ 19946522 (+)
LOC110531699 LOC106577657 coding upstream 62551 19920323 ~ 19939202 (+)
LOC110531697 NA coding upstream 87615 19876221 ~ 19914138 (+)
LOC110531693 LOC106577661 coding upstream 148033 19825712 ~ 19853720 (+)
LOC110531694 LOC106577663 coding upstream 177214 19817663 ~ 19824606 (+)
LOC110531703 LOC106577651 coding downstream 7149 20009183 ~ 20090543 (+)
LOC110531706 naa38 coding downstream 77348 20079382 ~ 20082084 (+)
LOC110532969 NA coding downstream 164561 20166595 ~ 20173950 (+)
LOC110531712 LOC106577641 coding downstream 184693 20186727 ~ 20254184 (+)
LOC110532972 LOC106577640 coding downstream 237723 20239757 ~ 20247172 (+)
G779227 NA non-coding upstream 53371 19948161 ~ 19948382 (+)
G779212 NA non-coding upstream 83369 19916391 ~ 19918384 (+)
G779189 NA non-coding upstream 126942 19874487 ~ 19874811 (+)
G779184 LOC106577660 non-coding upstream 129710 19864914 ~ 19872043 (+)
G779183 LOC106577660 non-coding upstream 130761 19862674 ~ 19870992 (+)
G779270 NA non-coding downstream 2514 20004548 ~ 20004785 (+)
G779306 chd3 non-coding downstream 60121 20062155 ~ 20062711 (+)
G779274 NA non-coding downstream 85143 20087177 ~ 20088195 (+)
G779334 NA non-coding downstream 102728 20104762 ~ 20105081 (+)
LOC110531664 LOC106577696 other upstream 1344179 18656177 ~ 18673318 (+)
G777396 NA other upstream 1501735 18499614 ~ 18500018 (+)
G777165 NA other upstream 1893271 18108019 ~ 18108482 (+)
G779291 chd3 other downstream 37577 20039611 ~ 20040283 (+)
G779964 NA other downstream 1099545 21101579 ~ 21102271 (+)
G783405 LOC106577615 other downstream 3041973 23044007 ~ 23067530 (+)

Expression


Co-expression Network