G779274


Basic Information

Item Value
gene id G779274
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 20087177 ~ 20088195 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU887903
TGTAAAAACTATCCGTAAAAAAACAAACCCCAGAAAATAACCCATCCCAAATTATTCCATAATTTGTTGTTACAGccggaattcaaaatggattaaagtcTCACCACCTCTTCCACCAAGTGAAAGCACagaaatatccaatttacatacatattcacacgtccgagtcaatactttgtagaaacaccattggcagcgattacagctgtgagtctttctgggtatgtctctaagagcttgccacacctggattgtattaTTCTAGCTTGGTTAAATTGattgttggtcattgctagacaaccagctgcaggtcttgccatagatttaagtatatttaagtcaaaacttcttggtaagcaacttcagtgtagatttggctttgtattctagattattgtcctgctgaaaggtgaattaatctcccagtttccggtggaaagcagactgaaccaggttttcttctaggattttgcctgtgcttagctccattgtttctgtttcaacCTGATAAACTCACCAGTTCTTAACGAttataagcatacccataacatgatgcaaccaccactatgcttgaaaatatggcaagtggtactcagtaatgtgttgcattgcattttcccccaaacataacttttatattcaggacaaagagggaattgctttgccacatttcttgcagtattacttaagtgccttgttacaaacaggatgcgtgttttagaatattttttattctgtacaggctttcttttcactgtcaattaggttactattgtggagtaactagtgttgttgatccatcctcagttttctatcactgccattaaactctaactgcttcaaagtcaccattgaccccatggtgaaatccctgagcgatttccttcctctcctgcaacgGAGTTAGAAAgcacgcctgtatctttgtagtgactgggtgagtTGATACATCATCtaaagtataattaataacttcaccatgctcaaaagggatattta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU887903 True 999 lncRNA 0.38 2 20087177 20088195

Neighbor

gene id symbol gene type direction distance location
LOC110531706 naa38 coding upstream 5093 20079382 ~ 20082084 (+)
LOC110531703 LOC106577651 coding upstream 66748 20009183 ~ 20090543 (+)
LOC110533004 NA coding upstream 140655 19942675 ~ 19946522 (+)
LOC110531699 LOC106577657 coding upstream 147975 19920323 ~ 19939202 (+)
LOC110531697 NA coding upstream 173039 19876221 ~ 19914138 (+)
LOC110532969 NA coding downstream 78400 20166595 ~ 20173950 (+)
LOC110531712 LOC106577641 coding downstream 98532 20186727 ~ 20254184 (+)
LOC110532972 LOC106577640 coding downstream 151562 20239757 ~ 20247172 (+)
LOC110531716 LOC106577637 coding downstream 191879 20280074 ~ 20282985 (+)
si:ch73-335l21.4 rn182 coding downstream 246308 20334503 ~ 20336164 (+)
G779306 chd3 non-coding upstream 24466 20062155 ~ 20062711 (+)
G779270 NA non-coding upstream 82392 20004548 ~ 20004785 (+)
G779266 NA non-coding upstream 85143 20001753 ~ 20002034 (+)
G779227 NA non-coding upstream 138795 19948161 ~ 19948382 (+)
G779212 NA non-coding upstream 168793 19916391 ~ 19918384 (+)
G779334 NA non-coding downstream 16567 20104762 ~ 20105081 (+)
G779335 NA non-coding downstream 17196 20105391 ~ 20105755 (+)
G779336 NA non-coding downstream 17912 20106107 ~ 20108010 (+)
G779339 NA non-coding downstream 22512 20110707 ~ 20110927 (+)
G779340 NA non-coding downstream 24522 20112717 ~ 20112945 (+)
G779291 chd3 other upstream 46894 20039611 ~ 20040283 (+)
LOC110531694 LOC106577663 other upstream 262571 19817663 ~ 19824606 (+)
G779964 NA other downstream 1013384 21101579 ~ 21102271 (+)
G783405 LOC106577615 other downstream 2955812 23044007 ~ 23067530 (+)
gba3 LOC106577614 other downstream 3017276 23105173 ~ 23111380 (+)
LOC110531760 LOC106577603 other downstream 3677510 23765275 ~ 23780276 (+)
LOC110531761 LOC106577604 other downstream 3714391 23802151 ~ 23804811 (+)

Expression


Co-expression Network