Gene
RNA
| Item | Value |
|---|---|
| gene id | G780278 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 20104825 ~ 20105899 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU889021 | True | 1075 | lncRNA | 0.40 | 1 | 20104825 | 20105899 |
20,103,600
20,104,000
20,104,400
20,104,800
20,105,200
20,105,600
20,106,000
20,106,400
20,106,800
20,106,800
20,107,200
20,107,600
20,108,000
20,108,400
20,108,800
20,109,200
20,109,600
NC_048573.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531707 | LOC106577647 | coding | downstream | 1738 | 20088107 ~ 20103087 (-) |
| LOC110531705 | LOC106577649 | coding | downstream | 25403 | 20076757 ~ 20079422 (-) |
| LOC110531704 | LOC106608762 | coding | downstream | 29335 | 20022194 ~ 20075490 (-) |
| LOC110531702 | LOC106577654 | coding | downstream | 132111 | 19966969 ~ 19972714 (-) |
| LOC110531700 | LOC106577652 | coding | downstream | 143581 | 19949847 ~ 19961244 (-) |
| LOC110531708 | LOC106577645 | coding | upstream | 241 | 20106140 ~ 20128782 (-) |
| fis1 | LOC106577644 | coding | upstream | 26103 | 20132002 ~ 20135504 (-) |
| LOC110531711 | LOC106577643 | coding | upstream | 45768 | 20151667 ~ 20168586 (-) |
| LOC110531713 | LOC106577639 | coding | upstream | 113111 | 20219010 ~ 20238861 (-) |
| ponzr1 | LOC106608771 | coding | upstream | 141589 | 20247488 ~ 20254228 (-) |
| G780279 | LOC106577651 | non-coding | downstream | 79179 | 20016542 ~ 20025646 (-) |
| G780339 | NA | non-coding | downstream | 99556 | 20004868 ~ 20005269 (-) |
| G780335 | NA | non-coding | downstream | 103579 | 20001015 ~ 20001246 (-) |
| G780322 | NA | non-coding | downstream | 124633 | 19979955 ~ 19980192 (-) |
| G780312 | NA | non-coding | downstream | 139215 | 19965347 ~ 19965610 (-) |
| G780372 | NA | non-coding | upstream | 3768 | 20109667 ~ 20109927 (-) |
| G780373 | NA | non-coding | upstream | 4679 | 20110578 ~ 20110785 (-) |
| G780374 | NA | non-coding | upstream | 12947 | 20118846 ~ 20119083 (-) |
| G780379 | NA | non-coding | upstream | 30611 | 20136510 ~ 20150178 (-) |
| G780407 | NA | non-coding | upstream | 97302 | 20203201 ~ 20203426 (-) |
| G780209 | NA | other | downstream | 280254 | 19817691 ~ 19824571 (-) |
| G778216 | NA | other | downstream | 1746722 | 18355441 ~ 18358103 (-) |
| G776822 | NA | other | downstream | 2444342 | 17659690 ~ 17660483 (-) |
| G776820 | NA | other | downstream | 2445422 | 17659016 ~ 17659403 (-) |
| LOC110531717 | LOC106577635 | other | upstream | 196179 | 20302051 ~ 20324316 (-) |
| LOC110531730 | adgrl3 | other | upstream | 825061 | 20930960 ~ 21272646 (-) |
| G782003 | NA | other | upstream | 1669819 | 21775718 ~ 21776210 (-) |
| G784602 | NA | other | upstream | 3631322 | 23737221 ~ 23739513 (-) |
| G784652 | NA | other | upstream | 3694884 | 23800783 ~ 23801684 (-) |
