G779339


Basic Information

Item Value
gene id G779339
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 20110707 ~ 20110927 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU887971
GTAATCCTCAATCTGCCTCAGAAGTGAATCTTCCCTAAAGACTGGTACCACAGCTACCATTGTGCAGTTCCTTACTGGCAGTTTGCTTAACAGGGTGGCTGGGTCTTAAATTGGGTCTGCTGGTCTGCTGGAGTTAAATTTGTTGGATTCCAATGTGTCAACCCATCCTATACATCTTTAGGGAAGCTTTCATGCTCTAGCAAACAAAGGGATATGAGGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU887971 True 221 lncRNA 0.45 1 20110707 20110927

Neighbor

gene id symbol gene type direction distance location
LOC110531706 naa38 coding upstream 28623 20079382 ~ 20082084 (+)
LOC110531703 LOC106577651 coding upstream 90278 20009183 ~ 20090543 (+)
LOC110533004 NA coding upstream 164185 19942675 ~ 19946522 (+)
LOC110531699 LOC106577657 coding upstream 171505 19920323 ~ 19939202 (+)
LOC110531697 NA coding upstream 196569 19876221 ~ 19914138 (+)
LOC110532969 NA coding downstream 55668 20166595 ~ 20173950 (+)
LOC110531712 LOC106577641 coding downstream 75800 20186727 ~ 20254184 (+)
LOC110532972 LOC106577640 coding downstream 128830 20239757 ~ 20247172 (+)
LOC110531716 LOC106577637 coding downstream 169147 20280074 ~ 20282985 (+)
si:ch73-335l21.4 rn182 coding downstream 223576 20334503 ~ 20336164 (+)
G779336 NA non-coding upstream 2697 20106107 ~ 20108010 (+)
G779335 NA non-coding upstream 4952 20105391 ~ 20105755 (+)
G779334 NA non-coding upstream 5626 20104762 ~ 20105081 (+)
G779340 NA non-coding downstream 1790 20112717 ~ 20112945 (+)
G779342 NA non-coding downstream 11793 20122720 ~ 20122920 (+)
G779344 NA non-coding downstream 13108 20124035 ~ 20124348 (+)
G779350 NA non-coding downstream 23447 20134374 ~ 20134811 (+)
G779351 NA non-coding downstream 24637 20135564 ~ 20138117 (+)
G779291 chd3 other upstream 70424 20039611 ~ 20040283 (+)
LOC110531694 LOC106577663 other upstream 286101 19817663 ~ 19824606 (+)
G779964 NA other downstream 990652 21101579 ~ 21102271 (+)
G783405 LOC106577615 other downstream 2933080 23044007 ~ 23067530 (+)
gba3 LOC106577614 other downstream 2994544 23105173 ~ 23111380 (+)
LOC110531760 LOC106577603 other downstream 3654778 23765275 ~ 23780276 (+)
LOC110531761 LOC106577604 other downstream 3691659 23802151 ~ 23804811 (+)

Expression


Co-expression Network