G780379


Basic Information

Item Value
gene id G780379
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 20136510 ~ 20150178 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU889124
ATGCAATGTCTTCTTTTTTCACATGTAGGTAGGCACGATAGGTATGTGTGCAGGTCTATGCTCCAAAATATGTAAATACATTATTTGGGCTTTGGCACTGGCTCTTCTTACTGGCAGCTGTATCAGCACGTACTTCAATAACCAACAGGACACAGTTTGTCACAAGACGAAGCACGAAAcagggggaccttgcgggcgctgcaggatttcagtccttcacggcgatcctcctgtgtagttctgggctgattcctcaccgttctcatgaccattgcaactccacgagACAACGCTAAACTGAGGGAACTCGTTTCAAAGTGCATCAGGGCACTGGAAATGGCATATTGCCCTTACAGACGGTTCCTGGTCGATGCCGCAATATCGACAGCAGAGAGCGCTATAATCAAAGGTTGCAATGTCTAGTGCACAGAACAGCAACACAGAGAGCCATagctccagttctctgctgccaatgactggaacgatctGCAAAATtatctgaagctggagactcatatctccctcattaactttaagcaccagttgtcagagcagctcacagatcactgcacctgtacatagcccatccaactacctcatccccatactgttatttattttgctcctttgcaccccggtatctctacttgcacactcatcttctgcacatctatcactccagtgtttattgctatattgtaattacttcaccactatggcctatttattgcctgtcCTCCCTTATCTTatctgtatatagactttttctattgttttattgactgtatgtttgtttattccatgtgtaactctggtgttgtttgtgtcacactgctttgctttatcttggcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU889124 True 852 lncRNA 0.45 4 20136510 20150178
Loading

Neighbor

gene id symbol gene type direction distance location
fis1 LOC106577644 coding downstream 1006 20132002 ~ 20135504 (-)
LOC110531708 LOC106577645 coding downstream 7728 20106140 ~ 20128782 (-)
LOC110531707 LOC106577647 coding downstream 33423 20088107 ~ 20103087 (-)
LOC110531705 LOC106577649 coding downstream 57088 20076757 ~ 20079422 (-)
LOC110531704 LOC106608762 coding downstream 61020 20022194 ~ 20075490 (-)
LOC110531711 LOC106577643 coding upstream 1489 20151667 ~ 20168586 (-)
LOC110531713 LOC106577639 coding upstream 68832 20219010 ~ 20238861 (-)
ponzr1 LOC106608771 coding upstream 97310 20247488 ~ 20254228 (-)
LOC110531717 LOC106577635 coding upstream 151873 20302051 ~ 20324316 (-)
si:ch73-335l21.2 LOC106577636 coding upstream 174239 20324417 ~ 20326689 (-)
G780374 NA non-coding downstream 17427 20118846 ~ 20119083 (-)
G780373 NA non-coding downstream 25725 20110578 ~ 20110785 (-)
G780372 NA non-coding downstream 26583 20109667 ~ 20109927 (-)
G780278 NA non-coding downstream 30611 20104825 ~ 20105899 (-)
G780279 LOC106577651 non-coding downstream 110864 20016542 ~ 20025646 (-)
G780407 NA non-coding upstream 53023 20203201 ~ 20203426 (-)
G780409 NA non-coding upstream 54661 20204839 ~ 20205120 (-)
G780515 NA non-coding upstream 207906 20358084 ~ 20358608 (-)
G780525 NA non-coding upstream 229921 20380099 ~ 20380659 (-)
G780209 NA other downstream 311939 19817691 ~ 19824571 (-)
G778216 NA other downstream 1778407 18355441 ~ 18358103 (-)
G776822 NA other downstream 2476027 17659690 ~ 17660483 (-)
G776820 NA other downstream 2477107 17659016 ~ 17659403 (-)
LOC110531730 adgrl3 other upstream 780782 20930960 ~ 21272646 (-)
G782003 NA other upstream 1625540 21775718 ~ 21776210 (-)
G784602 NA other upstream 3587043 23737221 ~ 23739513 (-)
G784652 NA other upstream 3650605 23800783 ~ 23801684 (-)

Expression

G780379 Expression in all Baseline Samples

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G780379 Expression in each Bioproject

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G780379 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 100.
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Co-expression Network