XLOC_026998


Basic Information

Item Value
gene id XLOC_026998
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 2588157 ~ 2588403 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00057112
ACTACAAACCTCTGGTGTTGGAAGGCTGAGTAAGGACCTTAATGTCTAAGGCATTAACGACGTTCTCTTGAACAGATGTCCTGTATCCGTCGACCACACTTCTTATGGTCTCTCTCAGATTTCCAAGGTTGTAAAACACTTGTAGGGCTGTCCCCACCTGAGATGGATTCTGTggggtaaataataataaacatccaTCAATCAAAATTGGTTTTAACAAGAAGAAAACGTGGGGTCACGGTAGCGC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00057112 True 247 lncRNA 0.43 1 2588157 2588403

Neighbor

gene id symbol gene type direction distance location
XLOC_026997 BX072538.1 coding upstream 6126 2581916 ~ 2582031 (+)
XLOC_026996 zdhhc17 coding upstream 79580 2482046 ~ 2508577 (+)
XLOC_026995 NA coding upstream 232968 2352772 ~ 2355189 (+)
XLOC_026994 NA coding upstream 238776 2345648 ~ 2349381 (+)
XLOC_026993 si:ch73-89b15.3 coding upstream 297889 2267641 ~ 2290268 (+)
XLOC_026999 gpr22a coding downstream 30729 2619132 ~ 2623487 (+)
XLOC_027000 dus4l coding downstream 49544 2637947 ~ 2642535 (+)
XLOC_027001 bcap29 coding downstream 66955 2655358 ~ 2666310 (+)
XLOC_027002 NA coding downstream 313944 2902347 ~ 2904041 (+)
XLOC_027003 CABZ01085700.1 coding downstream 699416 3287819 ~ 3290445 (+)
XLOC_026988 NA non-coding upstream 601299 1983663 ~ 1986858 (+)
XLOC_026987 NA non-coding upstream 613263 1950010 ~ 1974894 (+)
XLOC_027004 NA non-coding downstream 716775 3305178 ~ 3307854 (+)
XLOC_027005 NA non-coding downstream 721082 3309485 ~ 3338940 (+)
XLOC_027008 NA non-coding downstream 816466 3404869 ~ 3413155 (+)
XLOC_027009 NA non-coding downstream 833068 3421471 ~ 3422463 (+)

Expression


Co-expression Network