G779563


Basic Information

Item Value
gene id G779563
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 20482497 ~ 20482703 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU888237
TTTTGGTCTTGGCTCTTCTATTTTTGCAAtaatgctgcaatcagttggttgtaaatATGGGAAGAGCAGACACTTCCATATATTTATGTTGGCATAAtatttgtaatatttgttctggtCTTTTGTGGTGGATTAAACAATTAAGAAATAGCAATATTTTGgatattatttcattttcaaataaccgaatgtgagcggttgtaatct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU888237 True 207 lncRNA 0.31 1 20482497 20482703

Neighbor

gene id symbol gene type direction distance location
acap1 cenb1 coding upstream 27528 20418692 ~ 20455030 (+)
LOC110531718 LOC106577634 coding upstream 140765 20336421 ~ 20341732 (+)
si:ch73-335l21.4 rn182 coding upstream 146333 20334503 ~ 20336164 (+)
LOC110531716 LOC106577637 coding upstream 199512 20280074 ~ 20282985 (+)
LOC110532972 LOC106577640 coding upstream 235325 20239757 ~ 20247172 (+)
trip6 LOC106577628 coding downstream 49242 20531945 ~ 20539559 (+)
LOC118936359 LOC106577628 coding downstream 58213 20540916 ~ 20550011 (+)
LOC110531733 LOC106577625 coding downstream 809998 21292701 ~ 21355731 (+)
LOC118966017 NA coding downstream 947664 21430367 ~ 21431314 (+)
LOC110531736 NA coding downstream 1112329 21595032 ~ 22190303 (+)
G779520 NA non-coding upstream 72620 20409215 ~ 20409877 (+)
G779478 NA non-coding upstream 129760 20338526 ~ 20352737 (+)
G779469 NA non-coding upstream 154025 20328248 ~ 20328472 (+)
G779465 NA non-coding upstream 157463 20324497 ~ 20325034 (+)
G779574 NA non-coding downstream 13174 20495877 ~ 20496206 (+)
G779576 NA non-coding downstream 14808 20497511 ~ 20497775 (+)
G779584 NA non-coding downstream 25729 20508432 ~ 20510614 (+)
G779596 NA non-coding downstream 39421 20522124 ~ 20522420 (+)
G779597 NA non-coding downstream 39736 20522439 ~ 20522878 (+)
LOC110531706 naa38 other upstream 400443 20079382 ~ 20082084 (+)
G779291 chd3 other upstream 442214 20039611 ~ 20040283 (+)
LOC110531703 LOC106577651 other upstream 459029 20009183 ~ 20090543 (+)
LOC110531697 NA other upstream 590050 19876221 ~ 19914138 (+)
LOC110531694 LOC106577663 other upstream 657891 19817663 ~ 19824606 (+)
G779964 NA other downstream 618876 21101579 ~ 21102271 (+)
G783405 LOC106577615 other downstream 2561304 23044007 ~ 23067530 (+)
gba3 LOC106577614 other downstream 2622768 23105173 ~ 23111380 (+)
LOC110531760 LOC106577603 other downstream 3283002 23765275 ~ 23780276 (+)
LOC110531761 LOC106577604 other downstream 3319883 23802151 ~ 23804811 (+)

Expression


Co-expression Network