Gene
RNA
| Item | Value |
|---|---|
| gene id | G779597 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 20522439 ~ 20522878 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU888276 | True | 440 | lncRNA | 0.38 | 1 | 20522439 | 20522878 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| acap1 | cenb1 | coding | upstream | 67470 | 20418692 ~ 20455030 (+) |
| LOC110531718 | LOC106577634 | coding | upstream | 180707 | 20336421 ~ 20341732 (+) |
| si:ch73-335l21.4 | rn182 | coding | upstream | 186275 | 20334503 ~ 20336164 (+) |
| LOC110531716 | LOC106577637 | coding | upstream | 239454 | 20280074 ~ 20282985 (+) |
| LOC110532972 | LOC106577640 | coding | upstream | 275267 | 20239757 ~ 20247172 (+) |
| trip6 | LOC106577628 | coding | downstream | 9067 | 20531945 ~ 20539559 (+) |
| LOC118936359 | LOC106577628 | coding | downstream | 18038 | 20540916 ~ 20550011 (+) |
| LOC110531733 | LOC106577625 | coding | downstream | 769823 | 21292701 ~ 21355731 (+) |
| LOC118966017 | NA | coding | downstream | 907489 | 21430367 ~ 21431314 (+) |
| LOC110531736 | NA | coding | downstream | 1072154 | 21595032 ~ 22190303 (+) |
| G779596 | NA | non-coding | upstream | 19 | 20522124 ~ 20522420 (+) |
| G779584 | NA | non-coding | upstream | 11825 | 20508432 ~ 20510614 (+) |
| G779576 | NA | non-coding | upstream | 24664 | 20497511 ~ 20497775 (+) |
| G779574 | NA | non-coding | upstream | 26233 | 20495877 ~ 20496206 (+) |
| G779563 | NA | non-coding | upstream | 39736 | 20482497 ~ 20482703 (+) |
| G779599 | NA | non-coding | downstream | 757 | 20523635 ~ 20524000 (+) |
| G779689 | LOC106577627 | non-coding | downstream | 146516 | 20669394 ~ 20681070 (+) |
| G779719 | NA | non-coding | downstream | 198719 | 20721597 ~ 20722248 (+) |
| G779724 | LOC106577627 | non-coding | downstream | 207207 | 20730085 ~ 20742513 (+) |
| G779846 | NA | non-coding | downstream | 348867 | 20871745 ~ 20871955 (+) |
| LOC110531706 | naa38 | other | upstream | 440385 | 20079382 ~ 20082084 (+) |
| G779291 | chd3 | other | upstream | 482156 | 20039611 ~ 20040283 (+) |
| LOC110531703 | LOC106577651 | other | upstream | 498971 | 20009183 ~ 20090543 (+) |
| LOC110531697 | NA | other | upstream | 629992 | 19876221 ~ 19914138 (+) |
| LOC110531694 | LOC106577663 | other | upstream | 697833 | 19817663 ~ 19824606 (+) |
| G779964 | NA | other | downstream | 578701 | 21101579 ~ 21102271 (+) |
| G783405 | LOC106577615 | other | downstream | 2521129 | 23044007 ~ 23067530 (+) |
| gba3 | LOC106577614 | other | downstream | 2582593 | 23105173 ~ 23111380 (+) |
| LOC110531760 | LOC106577603 | other | downstream | 3242827 | 23765275 ~ 23780276 (+) |
| LOC110531761 | LOC106577604 | other | downstream | 3279708 | 23802151 ~ 23804811 (+) |
