G779599


Basic Information

Item Value
gene id G779599
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 20523635 ~ 20524000 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU888278
gaattctgcaaaaaatcctctgtgtacaatgtaaaacatcaaataatgcatgaggagcagaattaggccgatatgtgcacactgcccacaaaataaggTGGAAAATTAGCTGCACTtcataacctcctgccaaatgtatgaccatattagagacacatatttccctcagatgacacagatccacaaagaattcgaaaacataacccaattttgataaacttgtgtatctattgggtgaaataccagtgtctCTATTCCTAATAAaggtctctattcctttggaactttttgTGAGTATAACGTTTACTGTTCATTTATATTGTTTTTTATTTCCctttttattatctatttcacttgctttggcaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU888278 True 366 lncRNA 0.34 1 20523635 20524000

Neighbor

gene id symbol gene type direction distance location
acap1 cenb1 coding upstream 68666 20418692 ~ 20455030 (+)
LOC110531718 LOC106577634 coding upstream 181903 20336421 ~ 20341732 (+)
si:ch73-335l21.4 rn182 coding upstream 187471 20334503 ~ 20336164 (+)
LOC110531716 LOC106577637 coding upstream 240650 20280074 ~ 20282985 (+)
LOC110532972 LOC106577640 coding upstream 276463 20239757 ~ 20247172 (+)
trip6 LOC106577628 coding downstream 7945 20531945 ~ 20539559 (+)
LOC118936359 LOC106577628 coding downstream 16916 20540916 ~ 20550011 (+)
LOC110531733 LOC106577625 coding downstream 768701 21292701 ~ 21355731 (+)
LOC118966017 NA coding downstream 906367 21430367 ~ 21431314 (+)
LOC110531736 NA coding downstream 1071032 21595032 ~ 22190303 (+)
G779597 NA non-coding upstream 757 20522439 ~ 20522878 (+)
G779596 NA non-coding upstream 1215 20522124 ~ 20522420 (+)
G779584 NA non-coding upstream 13021 20508432 ~ 20510614 (+)
G779576 NA non-coding upstream 25860 20497511 ~ 20497775 (+)
G779574 NA non-coding upstream 27429 20495877 ~ 20496206 (+)
G779689 LOC106577627 non-coding downstream 145394 20669394 ~ 20681070 (+)
G779719 NA non-coding downstream 197597 20721597 ~ 20722248 (+)
G779724 LOC106577627 non-coding downstream 206085 20730085 ~ 20742513 (+)
G779846 NA non-coding downstream 347745 20871745 ~ 20871955 (+)
G779849 NA non-coding downstream 351024 20875024 ~ 20875470 (+)
LOC110531706 naa38 other upstream 441581 20079382 ~ 20082084 (+)
G779291 chd3 other upstream 483352 20039611 ~ 20040283 (+)
LOC110531703 LOC106577651 other upstream 500167 20009183 ~ 20090543 (+)
LOC110531697 NA other upstream 631188 19876221 ~ 19914138 (+)
LOC110531694 LOC106577663 other upstream 699029 19817663 ~ 19824606 (+)
G779964 NA other downstream 577579 21101579 ~ 21102271 (+)
G783405 LOC106577615 other downstream 2520007 23044007 ~ 23067530 (+)
gba3 LOC106577614 other downstream 2581471 23105173 ~ 23111380 (+)
LOC110531760 LOC106577603 other downstream 3241705 23765275 ~ 23780276 (+)
LOC110531761 LOC106577604 other downstream 3278586 23802151 ~ 23804811 (+)

Expression


Co-expression Network