Gene
RNA
| Item | Value |
|---|---|
| gene id | G779689 |
| gene name | LOC106577627 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 20669394 ~ 20681070 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU888373 | True | 997 | lncRNA | 0.51 | 3 | 20669394 | 20681070 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936359 | LOC106577628 | coding | upstream | 119383 | 20540916 ~ 20550011 (+) |
| trip6 | LOC106577628 | coding | upstream | 129835 | 20531945 ~ 20539559 (+) |
| acap1 | cenb1 | coding | upstream | 214425 | 20418692 ~ 20455030 (+) |
| LOC110531718 | LOC106577634 | coding | upstream | 327662 | 20336421 ~ 20341732 (+) |
| si:ch73-335l21.4 | rn182 | coding | upstream | 333230 | 20334503 ~ 20336164 (+) |
| LOC110531733 | LOC106577625 | coding | downstream | 611631 | 21292701 ~ 21355731 (+) |
| LOC118966017 | NA | coding | downstream | 749297 | 21430367 ~ 21431314 (+) |
| LOC110531736 | NA | coding | downstream | 913962 | 21595032 ~ 22190303 (+) |
| LOC118966179 | NA | coding | downstream | 1985306 | 22666376 ~ 22667896 (+) |
| sec24d | LOC106577619 | coding | downstream | 2047029 | 22728099 ~ 22756998 (+) |
| G779599 | NA | non-coding | upstream | 145394 | 20523635 ~ 20524000 (+) |
| G779597 | NA | non-coding | upstream | 146516 | 20522439 ~ 20522878 (+) |
| G779596 | NA | non-coding | upstream | 146974 | 20522124 ~ 20522420 (+) |
| G779584 | NA | non-coding | upstream | 158780 | 20508432 ~ 20510614 (+) |
| G779576 | NA | non-coding | upstream | 171619 | 20497511 ~ 20497775 (+) |
| G779719 | NA | non-coding | downstream | 40527 | 20721597 ~ 20722248 (+) |
| G779724 | LOC106577627 | non-coding | downstream | 49015 | 20730085 ~ 20742513 (+) |
| G779846 | NA | non-coding | downstream | 190675 | 20871745 ~ 20871955 (+) |
| G779849 | NA | non-coding | downstream | 193954 | 20875024 ~ 20875470 (+) |
| G779851 | NA | non-coding | downstream | 196372 | 20877442 ~ 20877751 (+) |
| LOC110531706 | naa38 | other | upstream | 587340 | 20079382 ~ 20082084 (+) |
| G779291 | chd3 | other | upstream | 629111 | 20039611 ~ 20040283 (+) |
| LOC110531703 | LOC106577651 | other | upstream | 645926 | 20009183 ~ 20090543 (+) |
| LOC110531697 | NA | other | upstream | 776947 | 19876221 ~ 19914138 (+) |
| LOC110531694 | LOC106577663 | other | upstream | 844788 | 19817663 ~ 19824606 (+) |
| G779964 | NA | other | downstream | 420509 | 21101579 ~ 21102271 (+) |
| G783405 | LOC106577615 | other | downstream | 2362937 | 23044007 ~ 23067530 (+) |
| gba3 | LOC106577614 | other | downstream | 2424401 | 23105173 ~ 23111380 (+) |
| LOC110531760 | LOC106577603 | other | downstream | 3084635 | 23765275 ~ 23780276 (+) |
| LOC110531761 | LOC106577604 | other | downstream | 3121516 | 23802151 ~ 23804811 (+) |
