G779719


Basic Information

Item Value
gene id G779719
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 20721597 ~ 20722248 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU888404
gcctgttcaccccactatcatccagaaggcgaggtcagtacaggtgcatcaaagcagggaccgagagactgaaaaacagcttctatctcaaggccatcagactgttaaacagccatcactaacattgattggctgctgccaacatactgactcaatctctaaccactttaataataaaacattGGATTAAATAAAtctatcactagtcactttaaactatgccactttatataatgtttacataccctacattactcatctcattctgtaccatcactcattcatatatttttatgtacataacCTTCAttcccttacacttgtgtgtataaggtagtagttgtggaattgttaggttagattactcgttggtcattactgcattgtcggaactagaagcacaagcatttcgctacactcgcattaacatctgctaaccatgtgtatgtgacaaatacaattttatttgatttgattaacttCTCGaacacatcctgactgatggcagcccattcttgcataatcaatgcttggagtttatcagaatttgtggggttgtgtttgtccacccgccttgaggattgaccacaagttctcaatgggattaagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU888404 True 610 lncRNA 0.39 2 20721597 20722248

Neighbor

gene id symbol gene type direction distance location
LOC118936359 LOC106577628 coding upstream 171586 20540916 ~ 20550011 (+)
trip6 LOC106577628 coding upstream 182038 20531945 ~ 20539559 (+)
acap1 cenb1 coding upstream 266628 20418692 ~ 20455030 (+)
LOC110531718 LOC106577634 coding upstream 379865 20336421 ~ 20341732 (+)
si:ch73-335l21.4 rn182 coding upstream 385433 20334503 ~ 20336164 (+)
LOC110531733 LOC106577625 coding downstream 570453 21292701 ~ 21355731 (+)
LOC118966017 NA coding downstream 708119 21430367 ~ 21431314 (+)
LOC110531736 NA coding downstream 872784 21595032 ~ 22190303 (+)
LOC118966179 NA coding downstream 1944128 22666376 ~ 22667896 (+)
sec24d LOC106577619 coding downstream 2005851 22728099 ~ 22756998 (+)
G779689 LOC106577627 non-coding upstream 40527 20669394 ~ 20681070 (+)
G779599 NA non-coding upstream 197597 20523635 ~ 20524000 (+)
G779597 NA non-coding upstream 198719 20522439 ~ 20522878 (+)
G779596 NA non-coding upstream 199177 20522124 ~ 20522420 (+)
G779584 NA non-coding upstream 210983 20508432 ~ 20510614 (+)
G779724 LOC106577627 non-coding downstream 7837 20730085 ~ 20742513 (+)
G779846 NA non-coding downstream 149497 20871745 ~ 20871955 (+)
G779849 NA non-coding downstream 152776 20875024 ~ 20875470 (+)
G779851 NA non-coding downstream 155194 20877442 ~ 20877751 (+)
G779876 NA non-coding downstream 194880 20917128 ~ 20917331 (+)
LOC110531706 naa38 other upstream 639543 20079382 ~ 20082084 (+)
G779291 chd3 other upstream 681314 20039611 ~ 20040283 (+)
LOC110531703 LOC106577651 other upstream 698129 20009183 ~ 20090543 (+)
LOC110531697 NA other upstream 829150 19876221 ~ 19914138 (+)
LOC110531694 LOC106577663 other upstream 896991 19817663 ~ 19824606 (+)
G779964 NA other downstream 379331 21101579 ~ 21102271 (+)
G783405 LOC106577615 other downstream 2321759 23044007 ~ 23067530 (+)
gba3 LOC106577614 other downstream 2383223 23105173 ~ 23111380 (+)
LOC110531760 LOC106577603 other downstream 3043457 23765275 ~ 23780276 (+)
LOC110531761 LOC106577604 other downstream 3080338 23802151 ~ 23804811 (+)

Expression


Co-expression Network