XLOC_027002



Basic Information


Item Value
gene id XLOC_027002
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 2902347 ~ 2904041 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00057533
CCATAGGACGGCAGAGCTGTAAAGCGTGAACTCGGATGCATGTGCAGGCAATAACTCGAAGAAGCCAGAGCGCAAAATCTACAATAGACACAAAAGACCTGAAGTTTCATCTAAAACTCAGCGGTCTGCTAATGCATCATGAAGTCCAGCatgtttgaaagaaaaaaaaagcgaaAGGAATTGTGTGTCATGACTGAAATGCTAAACTCGGCTGTGTTTTTGATGTGGACAAGAGGATGATGTGTTTCATAATGTGAGGCTCGTCTCTGGGGAGCGTGTGTGCTCTCAGGGGAGAACAGCGCTCACGTACAAATATTTATTATCAAAAGGGCTCGGCTATATTTGTCGCTGGTGCGTGTGGCTCTGGCCTGTTGTCCAGTCTGGG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00057533 True 385 lncRNA 0.46 2 2902347 2904041

Neighbor


gene id symbol gene type direction distance location
XLOC_027001 bcap29 coding upstream 236037 2655358 ~ 2666310 (+)
XLOC_027000 dus4l coding upstream 259812 2637947 ~ 2642535 (+)
XLOC_026999 gpr22a coding upstream 278860 2619132 ~ 2623487 (+)
XLOC_026998 NA coding upstream 313944 2588157 ~ 2588403 (+)
XLOC_026997 BX072538.1 coding upstream 320316 2581916 ~ 2582031 (+)
XLOC_027003 CABZ01085700.1 coding downstream 383778 3287819 ~ 3290445 (+)
XLOC_027004 NA coding downstream 401137 3305178 ~ 3307854 (+)
XLOC_027005 NA coding downstream 405444 3309485 ~ 3338940 (+)
XLOC_027006 nampta coding downstream 454342 3358383 ~ 3385452 (+)
XLOC_027007 sypl1 coding downstream 485825 3389866 ~ 3398385 (+)
XLOC_026995 NA non-coding upstream 547158 2352772 ~ 2355189 (+)
XLOC_026994 NA non-coding upstream 552966 2345648 ~ 2349381 (+)
XLOC_026988 NA non-coding upstream 915489 1983663 ~ 1986858 (+)
XLOC_027008 NA non-coding downstream 500828 3404869 ~ 3413155 (+)
XLOC_027009 NA non-coding downstream 517430 3421471 ~ 3422463 (+)
XLOC_027013 NA non-coding downstream 612662 3516703 ~ 3516910 (+)

Expression



Co-expression Network