Gene
RNA
| Item | Value |
|---|---|
| gene id | G779914 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 21026305 ~ 21028499 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU888619 | False | 373 | lncRNA | 0.47 | 2 | 21026305 | 21028499 |
| TU888620 | True | 382 | lncRNA | 0.56 | 2 | 21027228 | 21028499 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936359 | LOC106577628 | coding | upstream | 476294 | 20540916 ~ 20550011 (+) |
| trip6 | LOC106577628 | coding | upstream | 486746 | 20531945 ~ 20539559 (+) |
| acap1 | cenb1 | coding | upstream | 571336 | 20418692 ~ 20455030 (+) |
| LOC110531718 | LOC106577634 | coding | upstream | 684573 | 20336421 ~ 20341732 (+) |
| si:ch73-335l21.4 | rn182 | coding | upstream | 690141 | 20334503 ~ 20336164 (+) |
| LOC110531733 | LOC106577625 | coding | downstream | 264202 | 21292701 ~ 21355731 (+) |
| LOC118966017 | NA | coding | downstream | 401868 | 21430367 ~ 21431314 (+) |
| LOC110531736 | NA | coding | downstream | 566533 | 21595032 ~ 22190303 (+) |
| LOC118966179 | NA | coding | downstream | 1637877 | 22666376 ~ 22667896 (+) |
| sec24d | LOC106577619 | coding | downstream | 1699600 | 22728099 ~ 22756998 (+) |
| G779886 | NA | non-coding | upstream | 93167 | 20930894 ~ 20933138 (+) |
| G779876 | NA | non-coding | upstream | 108974 | 20917128 ~ 20917331 (+) |
| G779851 | NA | non-coding | upstream | 148554 | 20877442 ~ 20877751 (+) |
| G779849 | NA | non-coding | upstream | 150835 | 20875024 ~ 20875470 (+) |
| G779846 | NA | non-coding | upstream | 154350 | 20871745 ~ 20871955 (+) |
| G779939 | NA | non-coding | downstream | 42006 | 21070505 ~ 21071293 (+) |
| G781051 | NA | non-coding | downstream | 253846 | 21282345 ~ 21282590 (+) |
| G781054 | NA | non-coding | downstream | 254905 | 21283404 ~ 21283655 (+) |
| G781071 | NA | non-coding | downstream | 327733 | 21356232 ~ 21356543 (+) |
| G781068 | NA | non-coding | downstream | 328142 | 21356641 ~ 21357127 (+) |
| LOC110531706 | naa38 | other | upstream | 944251 | 20079382 ~ 20082084 (+) |
| G779291 | chd3 | other | upstream | 986022 | 20039611 ~ 20040283 (+) |
| LOC110531703 | LOC106577651 | other | upstream | 1002837 | 20009183 ~ 20090543 (+) |
| LOC110531697 | NA | other | upstream | 1133858 | 19876221 ~ 19914138 (+) |
| LOC110531694 | LOC106577663 | other | upstream | 1201699 | 19817663 ~ 19824606 (+) |
| G779964 | NA | other | downstream | 73080 | 21101579 ~ 21102271 (+) |
| G783405 | LOC106577615 | other | downstream | 2015508 | 23044007 ~ 23067530 (+) |
| gba3 | LOC106577614 | other | downstream | 2076972 | 23105173 ~ 23111380 (+) |
| LOC110531760 | LOC106577603 | other | downstream | 2737206 | 23765275 ~ 23780276 (+) |
| LOC110531761 | LOC106577604 | other | downstream | 2774087 | 23802151 ~ 23804811 (+) |
