XLOC_027006 (nampta)


Basic Information

Item Value
gene id XLOC_027006
gene name nampta
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 3358383 ~ 3385452 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00053275
ACAACAGAACTGACAGGCAGCAGCGCGACTCCAGTCACATCAAGGGGAAGATGGAGAAACACAGAGAAGCCGCGGATTTCAACATTTTGCTAGCTACCGACTCCTACAAGGTCACACATTATAAACAGTACCCACCCaacactagtaaggtgtactctTACTTTGAGTGCCGTGAGAAGAAGACAGACTCGACCAAGCCCCGAAAAGTCAAATACGACAAGACGGTCTTCTATGGGCTTCAGTACATTCTCCACAAATACTTAAAAGGACAGGTCATCACACCAGAGAAGATTCAGGAAGCTAAAGAGGTGTACCGGGAACACTTTCAGGATGATGTTTTCAATGAAAAGGGATGGAATTACATTTTGGAGAAATACAACGGTCACCTTCCCATCGAGATTAAGGCTGTGCCAGAGGGAAGCGTCATCCCACGGGGAAATGTGCTCTTTACTGTGGAAAACACAGATCCGGAGTGTTACTGGCTCACTAATTGGGTAGAGACTTGCCTGGTTCAGATCTGGTATCCCATCACCGTCGCCACAAACTCGAGGGAACAGAAGAAGATTCTGGCCAAATATCTCATGGAAACGTCGGGAAGCCTGGAAGGACTGGAGTATAAACTGCATGACTTTGGTTACAGAGGGGTTTCATCGCAAGAGaCGGCTGGTATCGGCGCATCTGCACACTTGGTGAACTTTAAAGGAACGGATACGGTGGCCGGGATCGGGGTCATCAAGAAATACTACGGCACCAAAGACCCGGTTCCTGGCTTCTCAGTACCAGCTGCAGAACACAGCACAATCACTGCCTGGGGAAAGGACCATGAGAAAGACGCTTTTGAGCACATCATCAAGCAGTTCCCGTCGGTGCCCGTGTCCATCGTCAGCGACAGCTACGACATCTACAACGCCTGTGAGAAGATCTGGGGTGAAGACCTGCGGAGTCTGATCGAGATGAGGAGCGCAGATGCCCCGCTGGTGGTGCGGCCCGATTCTGGAAATCCTCTCGACACCGTGCTCAAGGTCCTGGAGATTTTAGGCAAGAAGTTTCCTCCAGAGGAGAACTCTAAAGGCTATAAGGTGCTTCCGCCGTACATTCGGGTCATTCAGGGTGACGGTGTGGACATCAACACCCTACAGGAGATCGTGGAGGGCATGAAGGAGCACAGATGGAGCATCGAGAACATTGCGTTTGGCTCAGGAGGAGCTTTACTGCAGAAACTGACCCGAGATCTGCTCAACTGCTCTTTTAAGTGCAGTTATGTGGTGACGAACGGACTGGGCGTAAACGTCTTCAAGGACCCTGTGGCAGACCCCAATAAACGGTCAAAGAAGGGTCGTCTTTCTCTTCACAGGACGCCGAGTGGAGATTTCGTGACTCTGGAAGAGGGAAAAGGAGATCTGGAGGAATACGGAgagGACCTGCTGCACACCGTGTTCAGGAACGGCAAGATTGTAAAGACGTACACCTTCGATGAGGTGAGAGACAATGCCAAGCTGAAGGAGAGCGAAGTGCAGGATCTGCTGCTCTGAGAGTTTTTCCCCCATCGTCCTTTGCTCCGCCGACAGACGTGAGGACACACGGTTTCTGTCCCCTGACTCGCTACGCTTCACTGTCTCTTTCTAATGCGGACGAGAGCTGTTATCGTGCTATTTAAATCATTTAACCCAGCGTCAAAATGCACACGTCTTTGCAGGAATGGAGAcgtttatgtgtgtgtaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000030598

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00053275 True 1722 mRNA 0.50 11 3358383 3385452

Neighbor

gene id symbol gene type direction distance location
XLOC_027005 NA coding upstream 19443 3309485 ~ 3338940 (+)
XLOC_027004 NA coding upstream 50529 3305178 ~ 3307854 (+)
XLOC_027003 CABZ01085700.1 coding upstream 67938 3287819 ~ 3290445 (+)
XLOC_027002 NA coding upstream 454342 2902347 ~ 2904041 (+)
XLOC_027001 bcap29 coding upstream 692073 2655358 ~ 2666310 (+)
XLOC_027007 sypl1 coding downstream 4414 3389866 ~ 3398385 (+)
XLOC_027008 NA coding downstream 19417 3404869 ~ 3413155 (+)
XLOC_027009 NA coding downstream 36019 3421471 ~ 3422463 (+)
XLOC_027010 atxn7l1 coding downstream 53058 3438510 ~ 3446758 (+)
XLOC_027011 znf800b coding downstream 69694 3455146 ~ 3475397 (+)
XLOC_026998 NA non-coding upstream 769980 2588157 ~ 2588403 (+)
XLOC_026997 BX072538.1 non-coding upstream 776352 2581916 ~ 2582031 (+)
XLOC_027013 NA non-coding downstream 131251 3516703 ~ 3516910 (+)
XLOC_027014 NA non-coding downstream 428329 3813781 ~ 3815416 (+)
XLOC_027015 NA non-coding downstream 559264 3944716 ~ 3952419 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000066_03174704_03185343 NAMPT, NAMPT.S, NAMPTA coding CI01000066 null 3174704 ~ 3185343 (+)