G782344


Basic Information

Item Value
gene id G782344
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 22262239 ~ 22262439 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU891200
CGCTCCTTGACTCCCATAaccggggtacctgctcctgctgactccatggttTGGTGTGTAATTCTGTCAATGCATGTAGAATgattagggaatgaaaaccaggtgtgtatgggacaaaacaaatggatatatgaaaaatggagcggcgatggctagaaagcctgTGACGTCGATGGCTGatcgccgcccgaacaaggagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU891200 True 201 lncRNA 0.49 1 22262239 22262439

Neighbor

gene id symbol gene type direction distance location
LOC110531736 NA coding upstream 71936 21595032 ~ 22190303 (+)
LOC118966017 NA coding upstream 830925 21430367 ~ 21431314 (+)
LOC110531733 LOC106577625 coding upstream 906508 21292701 ~ 21355731 (+)
LOC118936359 LOC106577628 coding upstream 1712228 20540916 ~ 20550011 (+)
trip6 LOC106577628 coding upstream 1722680 20531945 ~ 20539559 (+)
LOC118966179 NA coding downstream 403937 22666376 ~ 22667896 (+)
sec24d LOC106577619 coding downstream 465660 22728099 ~ 22756998 (+)
LOC110531753 LOC106577617 coding downstream 748246 23010685 ~ 23011526 (+)
gba3 LOC106577614 coding downstream 842734 23105173 ~ 23111380 (+)
LOC110531759 LOC106577602 coding downstream 1473860 23736299 ~ 23749171 (+)
G782341 NA non-coding upstream 625 22261177 ~ 22261614 (+)
G782337 NA non-coding upstream 3739 22258233 ~ 22258500 (+)
G781747 NA non-coding upstream 254894 22006978 ~ 22007345 (+)
G781591 NA non-coding upstream 464926 21789791 ~ 21797313 (+)
G781555 NA non-coding upstream 525254 21736484 ~ 21736985 (+)
G782362 NA non-coding downstream 8032 22270471 ~ 22270715 (+)
G782430 NA non-coding downstream 58703 22321142 ~ 22321405 (+)
G782438 NA non-coding downstream 65071 22327510 ~ 22327771 (+)
G782440 NA non-coding downstream 66273 22328712 ~ 22328973 (+)
G782448 NA non-coding downstream 71794 22334233 ~ 22334460 (+)
G779964 NA other upstream 1159968 21101579 ~ 21102271 (+)
LOC110531706 naa38 other upstream 2180185 20079382 ~ 20082084 (+)
G779291 chd3 other upstream 2221956 20039611 ~ 20040283 (+)
LOC110531703 LOC106577651 other upstream 2238771 20009183 ~ 20090543 (+)
LOC110531697 NA other upstream 2369792 19876221 ~ 19914138 (+)
G783405 LOC106577615 other downstream 781568 23044007 ~ 23067530 (+)
LOC110531760 LOC106577603 other downstream 1503266 23765275 ~ 23780276 (+)
LOC110531761 LOC106577604 other downstream 1540147 23802151 ~ 23804811 (+)
LOC110531763 LOC106577738 other downstream 1571725 23834071 ~ 23839257 (+)

Expression


Co-expression Network