G782430



Basic Information


Item Value
gene id G782430
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 22321142 ~ 22321405 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU891287
gtaaaaatccaaataacttcacagaccttcattgtaaagggtttaagttaaacactgtttcccatgtttgttcaatgaaccataaacaattaatgaacatgcacctgtggaacggtcgttaagacactaacagcttacagacggtaggcaattaaggtcacagttatgaaaacttaggacactaaagaagcctttctactgactctgaaaaacacaaagaaagatgcccagggtccatgctcatctgtgtgaatgtgccttagg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU891287 True 264 lncRNA 0.39 1 22321142 22321405

Neighbor


gene id symbol gene type direction distance location
LOC110531736 NA coding upstream 130839 21595032 ~ 22190303 (+)
LOC118966017 NA coding upstream 889828 21430367 ~ 21431314 (+)
LOC110531733 LOC106577625 coding upstream 965411 21292701 ~ 21355731 (+)
LOC118936359 LOC106577628 coding upstream 1771131 20540916 ~ 20550011 (+)
trip6 LOC106577628 coding upstream 1781583 20531945 ~ 20539559 (+)
LOC118966179 NA coding downstream 344971 22666376 ~ 22667896 (+)
sec24d LOC106577619 coding downstream 406694 22728099 ~ 22756998 (+)
LOC110531753 LOC106577617 coding downstream 689280 23010685 ~ 23011526 (+)
gba3 LOC106577614 coding downstream 783768 23105173 ~ 23111380 (+)
LOC110531759 LOC106577602 coding downstream 1414894 23736299 ~ 23749171 (+)
G782362 NA non-coding upstream 50427 22270471 ~ 22270715 (+)
G782344 NA non-coding upstream 58703 22262239 ~ 22262439 (+)
G782341 NA non-coding upstream 59528 22261177 ~ 22261614 (+)
G782337 NA non-coding upstream 62642 22258233 ~ 22258500 (+)
G781747 NA non-coding upstream 313797 22006978 ~ 22007345 (+)
G782438 NA non-coding downstream 6105 22327510 ~ 22327771 (+)
G782440 NA non-coding downstream 7307 22328712 ~ 22328973 (+)
G782448 NA non-coding downstream 12828 22334233 ~ 22334460 (+)
G782559 NA non-coding downstream 93925 22415330 ~ 22415764 (+)
G782580 NA non-coding downstream 110621 22432026 ~ 22432241 (+)
G779964 NA other upstream 1218871 21101579 ~ 21102271 (+)
LOC110531706 naa38 other upstream 2239088 20079382 ~ 20082084 (+)
G779291 chd3 other upstream 2280859 20039611 ~ 20040283 (+)
LOC110531703 LOC106577651 other upstream 2297674 20009183 ~ 20090543 (+)
LOC110531697 NA other upstream 2428695 19876221 ~ 19914138 (+)
G783405 LOC106577615 other downstream 722602 23044007 ~ 23067530 (+)
LOC110531760 LOC106577603 other downstream 1444300 23765275 ~ 23780276 (+)
LOC110531761 LOC106577604 other downstream 1481181 23802151 ~ 23804811 (+)
LOC110531763 LOC106577738 other downstream 1512759 23834071 ~ 23839257 (+)

Expression



Co-expression Network