G782665


Basic Information

Item Value
gene id G782665
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 22511326 ~ 22511618 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU891524
cacacacacagtactaaacGTTTACTTGCTCAATGAATATAcataactcagcaaaaaaggaaGATCCTCTCACTcttaactgcgtttattttcagcaaacttaacatgtgtaaatatttgtatgaacatgacaagattcaacaactgagacataaactgaagaagttcaacagacatgtgactaacagaaatggaataatgtgtccctgaacaaaggggggaggtcaaaatcaaaagtaacagtcagtatctggtgtggtcaccagctgcattaagtactgcagtgcatctcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU891524 True 293 lncRNA 0.38 1 22511326 22511618

Neighbor

gene id symbol gene type direction distance location
LOC110531736 NA coding upstream 321023 21595032 ~ 22190303 (+)
LOC118966017 NA coding upstream 1080012 21430367 ~ 21431314 (+)
LOC110531733 LOC106577625 coding upstream 1155595 21292701 ~ 21355731 (+)
LOC118936359 LOC106577628 coding upstream 1961315 20540916 ~ 20550011 (+)
trip6 LOC106577628 coding upstream 1971767 20531945 ~ 20539559 (+)
LOC118966179 NA coding downstream 154758 22666376 ~ 22667896 (+)
sec24d LOC106577619 coding downstream 216481 22728099 ~ 22756998 (+)
LOC110531753 LOC106577617 coding downstream 499067 23010685 ~ 23011526 (+)
gba3 LOC106577614 coding downstream 593555 23105173 ~ 23111380 (+)
LOC110531759 LOC106577602 coding downstream 1224681 23736299 ~ 23749171 (+)
G782580 NA non-coding upstream 79085 22432026 ~ 22432241 (+)
G782559 NA non-coding upstream 95562 22415330 ~ 22415764 (+)
G782448 NA non-coding upstream 176866 22334233 ~ 22334460 (+)
G782440 NA non-coding upstream 182353 22328712 ~ 22328973 (+)
G782438 NA non-coding upstream 183555 22327510 ~ 22327771 (+)
G782666 NA non-coding downstream 2269 22513887 ~ 22514183 (+)
G782672 NA non-coding downstream 12837 22524455 ~ 22525209 (+)
G782716 NA non-coding downstream 72609 22584227 ~ 22588308 (+)
G782791 NA non-coding downstream 185151 22696769 ~ 22697184 (+)
G782801 LOC106569888 non-coding downstream 201795 22713413 ~ 22713922 (+)
G779964 NA other upstream 1409055 21101579 ~ 21102271 (+)
LOC110531706 naa38 other upstream 2429272 20079382 ~ 20082084 (+)
G779291 chd3 other upstream 2471043 20039611 ~ 20040283 (+)
LOC110531703 LOC106577651 other upstream 2487858 20009183 ~ 20090543 (+)
LOC110531697 NA other upstream 2618879 19876221 ~ 19914138 (+)
G783405 LOC106577615 other downstream 532389 23044007 ~ 23067530 (+)
LOC110531760 LOC106577603 other downstream 1254087 23765275 ~ 23780276 (+)
LOC110531761 LOC106577604 other downstream 1290968 23802151 ~ 23804811 (+)
LOC110531763 LOC106577738 other downstream 1322546 23834071 ~ 23839257 (+)

Expression


Co-expression Network