G782821


Basic Information

Item Value
gene id G782821
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 22762556 ~ 22762910 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU891687
gttcgagcccagggaggagcgaggagagggacggaagctatactgttacactggcaatactaaagtgcctataagaacattcaatagtcaaaggttaatgaaatacaaatggtatagagggaaatagtcctataataactacaacctaaaacgtcttaccagggaatattgaagactcatgttaaaaggaaccaccagctgtcatatgttctcatgttctgagcaaggaactgaaacgttagctttcttacatagcacatattgcacttttacgttcttctccaacactttgtttttgcattatttaaaccaaattgaacatgtttcattatctacttgaggcaaaattttattg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU891687 True 355 lncRNA 0.37 1 22762556 22762910

Neighbor

gene id symbol gene type direction distance location
sec24d LOC106577619 coding upstream 5558 22728099 ~ 22756998 (+)
LOC118966179 NA coding upstream 94660 22666376 ~ 22667896 (+)
LOC110531736 NA coding upstream 572253 21595032 ~ 22190303 (+)
LOC118966017 NA coding upstream 1331242 21430367 ~ 21431314 (+)
LOC110531733 LOC106577625 coding upstream 1406825 21292701 ~ 21355731 (+)
LOC110531753 LOC106577617 coding downstream 247775 23010685 ~ 23011526 (+)
gba3 LOC106577614 coding downstream 342263 23105173 ~ 23111380 (+)
LOC110531759 LOC106577602 coding downstream 973389 23736299 ~ 23749171 (+)
LOC110531760 LOC106577603 coding downstream 1002365 23765275 ~ 23780276 (+)
LOC110531762 LOC106577606 coding downstream 1029082 23791992 ~ 23795323 (+)
G782820 NA non-coding upstream 34 22761864 ~ 22762522 (+)
G782801 LOC106569888 non-coding upstream 48634 22713413 ~ 22713922 (+)
G782791 NA non-coding upstream 65372 22696769 ~ 22697184 (+)
G782716 NA non-coding upstream 174248 22584227 ~ 22588308 (+)
G782672 NA non-coding upstream 237347 22524455 ~ 22525209 (+)
G782824 NA non-coding downstream 3343 22766253 ~ 22766486 (+)
G782825 NA non-coding downstream 4295 22767205 ~ 22767404 (+)
G782868 NA non-coding downstream 60158 22823068 ~ 22848193 (+)
G782941 NA non-coding downstream 146305 22909215 ~ 22969770 (+)
G783396 NA non-coding downstream 276985 23039895 ~ 23040220 (+)
G779964 NA other upstream 1660285 21101579 ~ 21102271 (+)
LOC110531706 naa38 other upstream 2680502 20079382 ~ 20082084 (+)
G779291 chd3 other upstream 2722273 20039611 ~ 20040283 (+)
LOC110531703 LOC106577651 other upstream 2739088 20009183 ~ 20090543 (+)
LOC110531697 NA other upstream 2870109 19876221 ~ 19914138 (+)
G783405 LOC106577615 other downstream 281097 23044007 ~ 23067530 (+)
LOC110531761 LOC106577604 other downstream 1039676 23802151 ~ 23804811 (+)
LOC110531763 LOC106577738 other downstream 1071254 23834071 ~ 23839257 (+)

Expression


Co-expression Network