XLOC_027010 (atxn7l1)


Basic Information

Item Value
gene id XLOC_027010
gene name atxn7l1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 3438510 ~ 3446758 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00053278
TCAGGGCGAGTGTTTGATCCTAATAAGCACTGTGGGGTTTTGGACCCGGAGACAAAGCGGCCTTGTACTCGATCTTTAACCTGTAAGACTCACTCTCTGACCCACCGGCGAGCCGTCCCGGGGCGAAGGAAAGACTTTGACGTCCTCTTGGCGGAGCATAAAGGACGGGCGAAGGAAAAGGAGACGGGGCCGAAAAAAGATGTTCAAGCAGGCAGCCAGTCAGTGCAGGTCACACCGTCACATGATGCAGCACCCAGCCTATCAACAAGCTGCACCAATGGCAAGACTACGCCCACTCTCAAACTGCGGATGGCCAATTCACACTTACACAAAGTGTGTGGGGGTGCCGGTGCAGTGGTTTTGAGCTCAGCACCCGCTCCCCCTCCTCCAGATCCAGTGCCCAGCTGGCAGAAACCCAGCGCTGACACGCGTCTGTCCAGTGATGAAGGAGAAATGGAGCCGTCTGAAGAGTCTGAGAAGCTGCTGTGCCATTATTCACCAAACCACCCACGAGCCATGAGCTGCTGTGCGTTCAGCAGTCGGCTGATGGGACGGGGTCATTACGTGTTTGACAGACGGTGGGATCGGGTGAGGCTGGCGCTTCACTGCATGGTGGAGAAACACGTCAACTCTCTGATGTGGagGAAAGTCCCTCTAGCGGTGGAAAGTGCATCTGAAGTTTCTCCTCTGAGCTCAGCGTTTCTCTCGGCTCCTCTGGACGGCGTCTCCATGCTTTCTTTTTCTCACAACGGCGCTGGCGTTTTCTGTATTCGGGACCCTGAACCGGGGCCCCGACAGCAGAGGAATAAACCGGCCAAAAACCAGAAAGCCTCAGCAGAAATACCCAAAAAGCGGAAGAATGGGAACAGCTATGATTTTCCAGCACACATCAGTAACGGGACGATGGCTCTGAGTTCGAGGGCCAAACGAGTGCAGGATCCCACTGGCGTCCCGTCTCTCAGTGTTTTGCCATTTGGAGGCTCTGATGGGAGGAAGAGGAAGAGTTCGGGATCGAGCACCGGCAGCGACAAACCCAGCAAAACCACCAAATCCACTGCACTGGATGGGATTTTCAGgaagagcagcagtgttttactGGCGGCGGTCGCAGAAACACCACAAAACACCTTGAGCAGACAGGCAAGGGTCCCTCACTGATGCAGTGCAAATCTGTGGTGACGCTGGAAGCTCCTGGATGTCCCGTGGTTCCTGATGGGACTCCAGCACTGTGTCTGTCCTGCCTTTATCCACCGCTGCCTCTGTCCCCGCTACGGTTGAGTCTCAGCATATGCGTTTACTTTCCCTACAGGGCTTCTTCCTTTCCCTTCctgttaggaaaaaaaaaagcgCACAAAAAGCTTCATCTGAGAGTTGCTTTGAAATGACGATGTCTCAAGACCTTCAGTTTCCGATTTTTAACCAGCACACGACCCGTTTCAGACATTCAGCGATGCACATattgagttttatttttcattttttatgtaaatacagAGGAAAAAACTCCTTCAGACTCAACCGTGTCGATTTGAAGTGCACTTAAATTCATGCCTAGACAATAGGAGGGGAATTTAAACGTTTCAATTAAGGGAATATTTTACAGACGCTTTTTTTGGCAAGTCGTATT

Function

symbol description
atxn7l1 Orthologous to human ATXN7L1 (ataxin 7 like 1).

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-131127-383 Orthologous to human ATXN7L1 (ataxin 7 like 1).

Ensembl:

ensembl_id ENSDARG00000089860

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00053278 True 1627 mRNA 0.52 6 3438510 3446758

Neighbor

gene id symbol gene type direction distance location
XLOC_027009 NA coding upstream 16047 3421471 ~ 3422463 (+)
XLOC_027008 NA coding upstream 25355 3404869 ~ 3413155 (+)
XLOC_027007 sypl1 coding upstream 40125 3389866 ~ 3398385 (+)
XLOC_027006 nampta coding upstream 53058 3358383 ~ 3385452 (+)
XLOC_027005 NA coding upstream 99570 3309485 ~ 3338940 (+)
XLOC_027011 znf800b coding downstream 8388 3455146 ~ 3475397 (+)
XLOC_027012 grm8a coding downstream 31291 3478049 ~ 3745093 (+)
XLOC_027013 NA coding downstream 69945 3516703 ~ 3516910 (+)
XLOC_027014 NA coding downstream 367023 3813781 ~ 3815416 (+)
XLOC_027015 NA coding downstream 497958 3944716 ~ 3952419 (+)
XLOC_027004 NA non-coding upstream 130656 3305178 ~ 3307854 (+)
XLOC_027002 NA non-coding upstream 534469 2902347 ~ 2904041 (+)
XLOC_027017 NA non-coding downstream 613109 4059867 ~ 4063556 (+)
XLOC_027018 NA non-coding downstream 618560 4065318 ~ 4071401 (+)

Expression


Co-expression Network