G782941


Basic Information

Item Value
gene id G782941
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 22909215 ~ 22969770 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU891813
gcttatgcctgcccataccataaccccacagtgggacaacattccacaggccaatcAACAGCCGgttcaactctatgcgaaggagatgtgtcatgctgcatgaggcaaatggtggtcacaccagatactgactggttttctgatccacgcccctaccctGTTTTTAAGGTAttgcatctgtgaccaacagatgcatatctgtattcccagtcatgtgaaatccatagattagggcctaatt

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU891813 True 241 lncRNA 0.47 2 22909215 22969770

Neighbor

gene id symbol gene type direction distance location
sec24d LOC106577619 coding upstream 152217 22728099 ~ 22756998 (+)
LOC118966179 NA coding upstream 241319 22666376 ~ 22667896 (+)
LOC110531736 NA coding upstream 718912 21595032 ~ 22190303 (+)
LOC118966017 NA coding upstream 1477901 21430367 ~ 21431314 (+)
LOC110531733 LOC106577625 coding upstream 1553484 21292701 ~ 21355731 (+)
LOC110531753 LOC106577617 coding downstream 40915 23010685 ~ 23011526 (+)
gba3 LOC106577614 coding downstream 135403 23105173 ~ 23111380 (+)
LOC110531759 LOC106577602 coding downstream 766529 23736299 ~ 23749171 (+)
LOC110531760 LOC106577603 coding downstream 795505 23765275 ~ 23780276 (+)
LOC110531762 LOC106577606 coding downstream 822222 23791992 ~ 23795323 (+)
G782868 NA non-coding upstream 61022 22823068 ~ 22848193 (+)
G782825 NA non-coding upstream 141811 22767205 ~ 22767404 (+)
G782824 NA non-coding upstream 142729 22766253 ~ 22766486 (+)
G782821 NA non-coding upstream 146305 22762556 ~ 22762910 (+)
G782820 NA non-coding upstream 146693 22761864 ~ 22762522 (+)
G783396 NA non-coding downstream 70125 23039895 ~ 23040220 (+)
G783405 LOC106577615 non-coding downstream 74237 23044007 ~ 23067530 (+)
G783410 LOC106577615 non-coding downstream 84265 23054035 ~ 23057049 (+)
G783582 NA non-coding downstream 265014 23234784 ~ 23263612 (+)
G783847 NA non-coding downstream 471767 23441537 ~ 23441873 (+)
G779964 NA other upstream 1806944 21101579 ~ 21102271 (+)
LOC110531706 naa38 other upstream 2827161 20079382 ~ 20082084 (+)
G779291 chd3 other upstream 2868932 20039611 ~ 20040283 (+)
LOC110531703 LOC106577651 other upstream 2885747 20009183 ~ 20090543 (+)
LOC110531697 NA other upstream 3016768 19876221 ~ 19914138 (+)
LOC110531761 LOC106577604 other downstream 832816 23802151 ~ 23804811 (+)
LOC110531763 LOC106577738 other downstream 864394 23834071 ~ 23839257 (+)

Expression


Co-expression Network