G783396


Basic Information

Item Value
gene id G783396
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 23039895 ~ 23040220 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU892285
atcggtatcttgtgtgtgggtgatctaaatgaatgttcctatggtatttcatgataaattagttatttgaaccaatgattctgcaagtgcaaggtttctttaaagatatgaatgcacaacgcaatgttttgaacattggacagcctgtgttacaagtcatgaccgttttgagttttgtgtctagagttttgaaaaatgaccacaaggttctgaaattagtgccaaagggattgtaaaaaactgtaagaagctgattaaacagcatgatcattacacaggtgctggggacaataaaataactctaaaatgtgcagttatcACAACac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU892285 True 326 lncRNA 0.36 1 23039895 23040220

Neighbor

gene id symbol gene type direction distance location
LOC110531753 LOC106577617 coding upstream 28369 23010685 ~ 23011526 (+)
sec24d LOC106577619 coding upstream 282897 22728099 ~ 22756998 (+)
LOC118966179 NA coding upstream 371999 22666376 ~ 22667896 (+)
LOC110531736 NA coding upstream 849592 21595032 ~ 22190303 (+)
LOC118966017 NA coding upstream 1608581 21430367 ~ 21431314 (+)
gba3 LOC106577614 coding downstream 64953 23105173 ~ 23111380 (+)
LOC110531759 LOC106577602 coding downstream 696079 23736299 ~ 23749171 (+)
LOC110531760 LOC106577603 coding downstream 725055 23765275 ~ 23780276 (+)
LOC110531762 LOC106577606 coding downstream 751772 23791992 ~ 23795323 (+)
LOC110531761 LOC106577604 coding downstream 761931 23802151 ~ 23804811 (+)
G782941 NA non-coding upstream 70125 22909215 ~ 22969770 (+)
G782868 NA non-coding upstream 191702 22823068 ~ 22848193 (+)
G782825 NA non-coding upstream 272491 22767205 ~ 22767404 (+)
G782824 NA non-coding upstream 273409 22766253 ~ 22766486 (+)
G782821 NA non-coding upstream 276985 22762556 ~ 22762910 (+)
G783405 LOC106577615 non-coding downstream 3787 23044007 ~ 23067530 (+)
G783410 LOC106577615 non-coding downstream 13815 23054035 ~ 23057049 (+)
G783582 NA non-coding downstream 194564 23234784 ~ 23263612 (+)
G783847 NA non-coding downstream 401317 23441537 ~ 23441873 (+)
G783865 NA non-coding downstream 421690 23461910 ~ 23462140 (+)
G779964 NA other upstream 1937624 21101579 ~ 21102271 (+)
LOC110531706 naa38 other upstream 2957841 20079382 ~ 20082084 (+)
G779291 chd3 other upstream 2999612 20039611 ~ 20040283 (+)
LOC110531703 LOC106577651 other upstream 3016427 20009183 ~ 20090543 (+)
LOC110531697 NA other upstream 3147448 19876221 ~ 19914138 (+)
LOC110531763 LOC106577738 other downstream 793944 23834071 ~ 23839257 (+)

Expression


Co-expression Network