G783410 (LOC106577615)


Basic Information

Item Value
gene id G783410
gene name LOC106577615
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 23054035 ~ 23057049 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU892302
GGTATATGtagctgatgatgatgatcagtagacagaggaggaggacgaTAGCCGTGGCGTAAATGACTGGGTGGAGAGGCTCAATGCTGGGAGAGAAATACTCCACCCCAGTAAGATCCATGAGCACGGCATAGTTGCTGAGCGAGTCACAGGAGAGCGTGGTGAAGTTGTCGTGGTGGCCCAGGAGACGGCAGCCCTCGCTTTGCCAACCGCCCTGCCCACCCAACAGGCTGAAGTTCCAGCAGGCGGGCACGGCGTCAGTGCCGCGGGCAAACCTCCGCAGCGTGGCGTTCACCGGCATCCGCAGGCCGCGCAGTGGGAAACCatct

Function

NR:

description
adhesion G protein-coupled receptor A3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU892302 True 329 lncRNA 0.60 2 23054035 23057049

Neighbor

gene id symbol gene type direction distance location
LOC110531753 LOC106577617 coding upstream 42509 23010685 ~ 23011526 (+)
sec24d LOC106577619 coding upstream 297037 22728099 ~ 22756998 (+)
LOC118966179 NA coding upstream 386139 22666376 ~ 22667896 (+)
LOC110531736 NA coding upstream 863732 21595032 ~ 22190303 (+)
LOC118966017 NA coding upstream 1622721 21430367 ~ 21431314 (+)
gba3 LOC106577614 coding downstream 48124 23105173 ~ 23111380 (+)
LOC110531759 LOC106577602 coding downstream 679250 23736299 ~ 23749171 (+)
LOC110531760 LOC106577603 coding downstream 708226 23765275 ~ 23780276 (+)
LOC110531762 LOC106577606 coding downstream 734943 23791992 ~ 23795323 (+)
LOC110531761 LOC106577604 coding downstream 745102 23802151 ~ 23804811 (+)
G783396 NA non-coding upstream 13815 23039895 ~ 23040220 (+)
G782941 NA non-coding upstream 84265 22909215 ~ 22969770 (+)
G782868 NA non-coding upstream 205842 22823068 ~ 22848193 (+)
G782825 NA non-coding upstream 286631 22767205 ~ 22767404 (+)
G782824 NA non-coding upstream 287549 22766253 ~ 22766486 (+)
G783582 NA non-coding downstream 177735 23234784 ~ 23263612 (+)
G783847 NA non-coding downstream 384488 23441537 ~ 23441873 (+)
G783865 NA non-coding downstream 404861 23461910 ~ 23462140 (+)
G783866 NA non-coding downstream 405651 23462700 ~ 23462961 (+)
G783896 NA non-coding downstream 430640 23487689 ~ 23488013 (+)
G783405 LOC106577615 other upstream 6990 23044007 ~ 23067530 (+)
G779964 NA other upstream 1951764 21101579 ~ 21102271 (+)
LOC110531706 naa38 other upstream 2971981 20079382 ~ 20082084 (+)
G779291 chd3 other upstream 3013752 20039611 ~ 20040283 (+)
LOC110531703 LOC106577651 other upstream 3030567 20009183 ~ 20090543 (+)
LOC110531763 LOC106577738 other downstream 777115 23834071 ~ 23839257 (+)
hacd4 hacd4 other downstream 1025207 24077880 ~ 24087340 (+)

Expression


Co-expression Network