G783847


Basic Information

Item Value
gene id G783847
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 23441537 ~ 23441873 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU892764
gtagtatatggggctttggtgacaaaacggatggcactgtgatagactgtatctaatttattgagtagggtattggaggctattttgtaaatgatatcgccgaagtcgaggattggtaggatggtcagttttacaagggtaaaaTGAGtgaagcatgagtgaaggatgctttgttgcaaaataggaagccaattctagatttaactttggattggagatgtttgatgtgagtctggaaggagagtttacagtctaaccagacaccgaggtatttgtagttgtccacatattctaagtcagaaccatccagagtagtgatgttggacaggcgggtagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU892764 True 337 lncRNA 0.42 1 23441537 23441873

Neighbor

gene id symbol gene type direction distance location
gba3 LOC106577614 coding upstream 330157 23105173 ~ 23111380 (+)
LOC110531753 LOC106577617 coding upstream 430011 23010685 ~ 23011526 (+)
sec24d LOC106577619 coding upstream 684539 22728099 ~ 22756998 (+)
LOC118966179 NA coding upstream 773641 22666376 ~ 22667896 (+)
LOC110531736 NA coding upstream 1251234 21595032 ~ 22190303 (+)
LOC110531759 LOC106577602 coding downstream 294426 23736299 ~ 23749171 (+)
LOC110531760 LOC106577603 coding downstream 323402 23765275 ~ 23780276 (+)
LOC110531762 LOC106577606 coding downstream 350119 23791992 ~ 23795323 (+)
LOC110531761 LOC106577604 coding downstream 360278 23802151 ~ 23804811 (+)
LOC110531763 LOC106577738 coding downstream 392198 23834071 ~ 23839257 (+)
G783582 NA non-coding upstream 177925 23234784 ~ 23263612 (+)
G783405 LOC106577615 non-coding upstream 374007 23044007 ~ 23067530 (+)
G783410 LOC106577615 non-coding upstream 384488 23054035 ~ 23057049 (+)
G783396 NA non-coding upstream 401317 23039895 ~ 23040220 (+)
G782941 NA non-coding upstream 471767 22909215 ~ 22969770 (+)
G783865 NA non-coding downstream 20037 23461910 ~ 23462140 (+)
G783866 NA non-coding downstream 20827 23462700 ~ 23462961 (+)
G783896 NA non-coding downstream 45816 23487689 ~ 23488013 (+)
G784056 NA non-coding downstream 180575 23622448 ~ 23622681 (+)
G784063 NA non-coding downstream 195810 23637683 ~ 23637886 (+)
G779964 NA other upstream 2339266 21101579 ~ 21102271 (+)
LOC110531706 naa38 other upstream 3359483 20079382 ~ 20082084 (+)
G779291 chd3 other upstream 3401254 20039611 ~ 20040283 (+)
hacd4 hacd4 other downstream 640383 24077880 ~ 24087340 (+)
G785138 NA other downstream 1140514 24582387 ~ 24582877 (+)

Expression


Co-expression Network