G783865


Basic Information

Item Value
gene id G783865
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 23461910 ~ 23462140 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU892782
TGCACACACTTAAGACCtagcaaacacacatacaaatcGCATGCAGAAAGTCAAGTAATGaaaacgcacacatacacattcacacaaactcaCGATaaaaccccaacacacacaaactcactataaaaccccaacacacacacactcactcataagaccccaacacacacacactcataagaccccaacacacacaaactcactataaaaccccaacacacacacacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU892782 True 231 lncRNA 0.42 1 23461910 23462140

Neighbor

gene id symbol gene type direction distance location
gba3 LOC106577614 coding upstream 350530 23105173 ~ 23111380 (+)
LOC110531753 LOC106577617 coding upstream 450384 23010685 ~ 23011526 (+)
sec24d LOC106577619 coding upstream 704912 22728099 ~ 22756998 (+)
LOC118966179 NA coding upstream 794014 22666376 ~ 22667896 (+)
LOC110531736 NA coding upstream 1271607 21595032 ~ 22190303 (+)
LOC110531759 LOC106577602 coding downstream 274159 23736299 ~ 23749171 (+)
LOC110531760 LOC106577603 coding downstream 303135 23765275 ~ 23780276 (+)
LOC110531762 LOC106577606 coding downstream 329852 23791992 ~ 23795323 (+)
LOC110531761 LOC106577604 coding downstream 340011 23802151 ~ 23804811 (+)
LOC110531763 LOC106577738 coding downstream 371931 23834071 ~ 23839257 (+)
G783847 NA non-coding upstream 20037 23441537 ~ 23441873 (+)
G783582 NA non-coding upstream 198298 23234784 ~ 23263612 (+)
G783405 LOC106577615 non-coding upstream 394380 23044007 ~ 23067530 (+)
G783410 LOC106577615 non-coding upstream 404861 23054035 ~ 23057049 (+)
G783396 NA non-coding upstream 421690 23039895 ~ 23040220 (+)
G783866 NA non-coding downstream 560 23462700 ~ 23462961 (+)
G783896 NA non-coding downstream 25549 23487689 ~ 23488013 (+)
G784056 NA non-coding downstream 160308 23622448 ~ 23622681 (+)
G784063 NA non-coding downstream 175543 23637683 ~ 23637886 (+)
G784096 NA non-coding downstream 334070 23796210 ~ 23797923 (+)
G779964 NA other upstream 2359639 21101579 ~ 21102271 (+)
LOC110531706 naa38 other upstream 3379856 20079382 ~ 20082084 (+)
G779291 chd3 other upstream 3421627 20039611 ~ 20040283 (+)
hacd4 hacd4 other downstream 620116 24077880 ~ 24087340 (+)
G785138 NA other downstream 1120247 24582387 ~ 24582877 (+)

Expression


Co-expression Network