G783896


Basic Information

Item Value
gene id G783896
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 23487689 ~ 23488013 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU892813
cactgaaatacaaaaaacaataaagtgaacgagcgaaaaccgaaacagtcttGTCTGgcgacatacacaaagacagaaaataaacacccacgaaacacagctggaaaaaggctacctaagtatgattctcaatcagagacaactaacgacacctgcctctgattgagaaccatactaggccgaacacagaaaccaacatagaaaaacaaacatagactgcccaccccaactcacgccctgaacatactaaaataaagacaaaacaaaggaactaaggtcagaacgtgacagaggaGCCTTTTACATTTCCCGAAATAGTTTGTGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU892813 True 325 lncRNA 0.41 1 23487689 23488013

Neighbor

gene id symbol gene type direction distance location
gba3 LOC106577614 coding upstream 376309 23105173 ~ 23111380 (+)
LOC110531753 LOC106577617 coding upstream 476163 23010685 ~ 23011526 (+)
sec24d LOC106577619 coding upstream 730691 22728099 ~ 22756998 (+)
LOC118966179 NA coding upstream 819793 22666376 ~ 22667896 (+)
LOC110531736 NA coding upstream 1297386 21595032 ~ 22190303 (+)
LOC110531759 LOC106577602 coding downstream 248286 23736299 ~ 23749171 (+)
LOC110531760 LOC106577603 coding downstream 277262 23765275 ~ 23780276 (+)
LOC110531762 LOC106577606 coding downstream 303979 23791992 ~ 23795323 (+)
LOC110531761 LOC106577604 coding downstream 314138 23802151 ~ 23804811 (+)
LOC110531763 LOC106577738 coding downstream 346058 23834071 ~ 23839257 (+)
G783866 NA non-coding upstream 24728 23462700 ~ 23462961 (+)
G783865 NA non-coding upstream 25549 23461910 ~ 23462140 (+)
G783847 NA non-coding upstream 45816 23441537 ~ 23441873 (+)
G783582 NA non-coding upstream 224077 23234784 ~ 23263612 (+)
G783405 LOC106577615 non-coding upstream 420159 23044007 ~ 23067530 (+)
G784056 NA non-coding downstream 134435 23622448 ~ 23622681 (+)
G784063 NA non-coding downstream 149670 23637683 ~ 23637886 (+)
G784096 NA non-coding downstream 308197 23796210 ~ 23797923 (+)
G784097 NA non-coding downstream 319880 23807893 ~ 23808082 (+)
G784165 NA non-coding downstream 327836 23815849 ~ 23816178 (+)
G779964 NA other upstream 2385418 21101579 ~ 21102271 (+)
LOC110531706 naa38 other upstream 3405635 20079382 ~ 20082084 (+)
G779291 chd3 other upstream 3447406 20039611 ~ 20040283 (+)
hacd4 hacd4 other downstream 594243 24077880 ~ 24087340 (+)
G785138 NA other downstream 1094374 24582387 ~ 24582877 (+)

Expression


Co-expression Network