XLOC_027013


Basic Information

Item Value
gene id XLOC_027013
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 3516703 ~ 3516910 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00057116
ATCATAACACATTTAGGTTCATTTTGATctgaaatatgtatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatataatataataatatatatataatataataatatatatatatatatatatataaatttgattCGGCACACGTATATACCAAACGGTTCATGttcgtt

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00057116 True 208 lncRNA 0.13 1 3516703 3516910

Neighbor

gene id symbol gene type direction distance location
XLOC_027011 znf800b coding upstream 41306 3455146 ~ 3475397 (+)
XLOC_027010 atxn7l1 coding upstream 69945 3438510 ~ 3446758 (+)
XLOC_027009 NA coding upstream 94240 3421471 ~ 3422463 (+)
XLOC_027008 NA coding upstream 103548 3404869 ~ 3413155 (+)
XLOC_027007 sypl1 coding upstream 118318 3389866 ~ 3398385 (+)
XLOC_027014 NA coding downstream 296871 3813781 ~ 3815416 (+)
XLOC_027015 NA coding downstream 427806 3944716 ~ 3952419 (+)
XLOC_027016 gpr37b coding downstream 463337 3980247 ~ 3998490 (+)
XLOC_027017 NA coding downstream 542957 4059867 ~ 4063556 (+)
XLOC_027018 NA coding downstream 548408 4065318 ~ 4071401 (+)
XLOC_027005 NA non-coding upstream 177763 3309485 ~ 3338940 (+)
XLOC_027004 NA non-coding upstream 208849 3305178 ~ 3307854 (+)
XLOC_027002 NA non-coding upstream 612662 2902347 ~ 2904041 (+)
XLOC_027020 NA non-coding downstream 615180 4132090 ~ 4160221 (+)

Expression


Co-expression Network