G784097


Basic Information

Item Value
gene id G784097
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 23807893 ~ 23808082 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU893029
ttctaattctgtctgtcatagttgaagtgtacctatgatgaaaattacaggcctctcatctttttaagtgggagaacttgctcaattggtggctgactaaatactttttttgccccactgtatgtacaatgggtcccctctctgtctcttccactCTCTTTCCCCAccccattcattgtgtaacaagccg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU893029 True 190 lncRNA 0.43 1 23807893 23808082

Neighbor

gene id symbol gene type direction distance location
LOC110531761 LOC106577604 coding upstream 3082 23802151 ~ 23804811 (+)
LOC110531762 LOC106577606 coding upstream 12570 23791992 ~ 23795323 (+)
LOC110531760 LOC106577603 coding upstream 27617 23765275 ~ 23780276 (+)
LOC110531759 LOC106577602 coding upstream 58722 23736299 ~ 23749171 (+)
gba3 LOC106577614 coding upstream 696513 23105173 ~ 23111380 (+)
LOC110531763 LOC106577738 coding downstream 25989 23834071 ~ 23839257 (+)
LOC110532973 aco1 coding downstream 34396 23842478 ~ 23845111 (+)
LOC110531766 LOC106577601 coding downstream 68959 23877041 ~ 23886260 (+)
tspan5a LOC106577600 coding downstream 78695 23886777 ~ 23914624 (+)
LOC110531768 NA coding downstream 168448 23976530 ~ 23987341 (+)
G784096 NA non-coding upstream 9970 23796210 ~ 23797923 (+)
G784063 NA non-coding upstream 170007 23637683 ~ 23637886 (+)
G784056 NA non-coding upstream 185212 23622448 ~ 23622681 (+)
G783896 NA non-coding upstream 319880 23487689 ~ 23488013 (+)
G783866 NA non-coding upstream 344932 23462700 ~ 23462961 (+)
G784165 NA non-coding downstream 7767 23815849 ~ 23816178 (+)
G784176 NA non-coding downstream 24731 23832813 ~ 23833043 (+)
G784179 NA non-coding downstream 33173 23841255 ~ 23841479 (+)
G784200 NA non-coding downstream 68249 23876331 ~ 23918330 (+)
G783405 LOC106577615 other upstream 760848 23044007 ~ 23067530 (+)
G779964 NA other upstream 2705622 21101579 ~ 21102271 (+)
hacd4 hacd4 other downstream 274174 24077880 ~ 24087340 (+)
G785138 NA other downstream 774305 24582387 ~ 24582877 (+)
LOC110531788 LOC106577570 other downstream 1122269 24872772 ~ 24952098 (+)
LOC110531825 LOC106577732 other downstream 1719591 25525371 ~ 25532692 (+)

Expression


Co-expression Network