G784200


Basic Information

Item Value
gene id G784200
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 23876331 ~ 23918330 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU893144
ggggggggggggggggggggggggggggggggtagttagCTGGAACAGCTGGCTGTtgacaggggagagggacaggataCCTTGGCACGTGACGATGGGAAACACACAGAGGGAGGAAGGTTCTGTAGAAAGGAATGGGGGGGCAGGGATTTGCTATGAGGCAGGCATTGGGGGTCGGGGGGCTGTGGGAGTTAAGAGTCATTTAGCTCTGTGCCGTTAGCCTCTGCTCTGTGAGCGACGCCTGGTGGGACACCGTTTTGTTCTCGTGCGACCGCAGCTTGGAGACCACGTCGATGAAGGCCAGCCCCTGCACTTCTTTA
>TU893143
CGCCAGCAATCATCTTTAATTATCTGTTCGAGTTACAATCTTCCAAATGTACAACTCATCAATGACATTTACAACAAACATTTATGTTTATAATATCGTAATGCAGTTACTTTGTGGTTACATCTTGATTGGATTGTGTCTTTGTGAGGTTACAAATCGGATAAATTACCATTCATACCTGACAATAAAGAACAAAGTGCCGATTAATAAACAAATAATTTATAATAAAAAAACGCCTATGTCACCAGACGGTGCCTAACGCAGTATCCAACATGCTGGAATGTGCATGTTATCGATACTTCGAGTGGGAGAAACCATCACACATGCAAACCAAGAACTGGCAGGGAGAAACCATAGAGCAGTACCACAAGTCGACAGGGGAGGGTGTCCCCAGACTGGGGGGGGGATAGTGTTAAATAACTTAGGAACCACTTAATATGATATAGGAATCTTCTGAAATGTGCAGCGCTACCCCATTGGTCCCCGACTCATGATAAAAGCAACAAATCCAGACAGTATATACCTGGTATGGCTGACTGCTTCACTGTACACTCTCAGAGACCAGGGAGTGAGTGACTGGGTTCTTCTGGAGGTTCTAACTTCTAACCTATGCATTATCTCCTCCATGTCTGAGGATGCTCAGGTGGGCACTTGTATGTGCTAGTGGAGCTCAAGCCTGGGGTATGTTCAGTTGGGGGTGAAACGTTCAcaacattgcagatagaaatgtaacaGGAGTCAACAACATACCCTATTCTACTTGACATTTCTGTTCTACAtgatatatttattatatatattctgtAACGATTCACCATTCTAAACATTCCCCTGATATAACAGTAAGGTTGTTTGGGACAATAAGTCAGGTTTAGTTTGGGTTTGTATGAAAgtgaaagggaagagagaggattgAGTGGCATTATCAAGCAAACTCCTTTCAAACGGCAGTTTAAGTACAAACATGATTGAACACTATTCTCTGTAAGATTTGCCACAGGGCTGTGGTTTCGTGTACGTGACAGGTTCAAAATGAACACGGATACACCATCAACTGGACTAAAACATGCATGTCGACTTCAATTCGGGCTGGTACTCAAGCTAACATGGGACACGGAAGTAAAGAACACAGCAAGGATGCATTGGCTGCTAAATTTGTTTTCAAACCACCGAacttaaatcgttttttttttgtgttattttttaaatattttttttacgttATCGGCGAGTTATTGAAGTGAATGGGTTTCACAGCTATGGTCATCATAAAAAGTGTTCTCTCTTTGTATGTCTATCTATTGCGAAACGAAAAGGCTGTCTACTGGCGCCTTGTTTTTTTAATATGGATGGAGCTGCTGCTTGGAACGGAGGATGAATGCAcggggggtgggacaggataCCTTGGCACGTGACGATGGGAAACACACAGAGGGAGGAAGGTTCTGTAGAAAGGAATGGGGGGGCAGGGATTTGCTATGAGGCAGGCATTGGGGGTCGGGGGGCTGTGGGAGTTAAGAGTCATTTAGCTCTGTGCCGTTAGCCTCTGCTCTGTGAGCGACGCCTGGTGGGACACCGTTTTGTTCTCGTGCGACCGCAGCTTGGAGACCACGTCGATGAAGGCCAGCCCCTGCACTTCTTTA

Function

NR:

description
PREDICTED: rap1 GTPase-GDP dissociation stimulator 1-B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU893144 False 320 lncRNA 0.61 2 23876331 23918330
TU893143 True 1643 lncRNA 0.43 3 23916616 23918330

Neighbor

gene id symbol gene type direction distance location
LOC110532973 aco1 coding upstream 31220 23842478 ~ 23845111 (+)
LOC110531763 LOC106577738 coding upstream 37074 23834071 ~ 23839257 (+)
LOC110531761 LOC106577604 coding upstream 71520 23802151 ~ 23804811 (+)
LOC110531762 LOC106577606 coding upstream 81008 23791992 ~ 23795323 (+)
LOC110531760 LOC106577603 coding upstream 96055 23765275 ~ 23780276 (+)
LOC110531768 NA coding downstream 58200 23976530 ~ 23987341 (+)
LOC110531767 LOC106577598 coding downstream 76896 23995226 ~ 24013837 (+)
hacd4 hacd4 coding downstream 159550 24077880 ~ 24087340 (+)
mllt3 LOC106577592 coding downstream 230716 24149046 ~ 24197744 (+)
LOC110531780 bank1 coding downstream 451499 24369829 ~ 24403607 (+)
G784179 NA non-coding upstream 34852 23841255 ~ 23841479 (+)
G784176 NA non-coding upstream 43288 23832813 ~ 23833043 (+)
G784165 NA non-coding upstream 60153 23815849 ~ 23816178 (+)
G784097 NA non-coding upstream 68249 23807893 ~ 23808082 (+)
G784096 NA non-coding upstream 78408 23796210 ~ 23797923 (+)
G784262 NA non-coding downstream 75859 23994189 ~ 23994389 (+)
G784269 NA non-coding downstream 99574 24017904 ~ 24018141 (+)
G784277 NA non-coding downstream 107472 24025802 ~ 24026012 (+)
G784271 NA non-coding downstream 120297 24038627 ~ 24041484 (+)
gba3 LOC106577614 other upstream 768292 23105173 ~ 23111380 (+)
G783405 LOC106577615 other upstream 829286 23044007 ~ 23067530 (+)
G785138 NA other downstream 664057 24582387 ~ 24582877 (+)
LOC110531788 LOC106577570 other downstream 1012021 24872772 ~ 24952098 (+)
LOC110531825 LOC106577732 other downstream 1609343 25525371 ~ 25532692 (+)
G786091 NA other downstream 1626901 25545231 ~ 25546967 (+)

Expression


Co-expression Network