G784981


Basic Information

Item Value
gene id G784981
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 24423737 ~ 24424584 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU894016
ATTTGTCCTTTTTTTATTACACAATGTTAAGATTTACTTTTCAAATACACCATTTAAATTTGAATATTTACACACAGGCTTTCATACAGCACACTATCTATAAAGACACAATATAATCTGTACATTGCATCACAACAACATTTCAATgacaaacattaccattccatgtcaaataaataaatggtaAAAATGACAAAATATCAGAGTCTCAATATGAAGTTAACATGATAAACCCCCCTTTAAACAcaaactgaaaaaaataattcTACAAACACAATCAAAATACACATCTGTTAGTTCAATGCATTCTAGAATACAGGACATGTACGCATAGGCTACCAATATGCAGCATGATTCTTCATAGGGACTGAATAGGTGTATAACTACTGCATCTACTGTTTACTAGGTGTAAATGTTCAGTTTCATTTGAGAGGCCCAGAGGCTCAAAGTTCTTGGTTGACCAATGTTATTAGTTGATAGCCAAATGTCCCAGTAAGAGTTCACTTGTTGTTTCTCCAGTACTTTCATCAGATAAAGAGTTGATCAGATGCAAAGCAAAGTCTGATATTTTGTCCCAATCTTTTTTAATGTTGACCACCACATTTTGTTTCGTCTCATCTTCATATGTTACTTCAGAAATGGACTCTAGATCACTTATTGCGCCTTGAACCACATACGCCTTAGCTATTCTCTCTAGTTTATCCTCCATATGAATCTCCGCCTGTTCCAAAACATTCTTCTCAAACTGAGCCCTGTGAGAAGACTTTCGACAGCAGAACTCATTCCAAGGCAATACGGACAGGGTCAACAGCCCTACAATTCCGAGCACCACCAGCAAGCCAAATACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU894016 True 848 lncRNA 0.36 1 24423737 24424584

Neighbor

gene id symbol gene type direction distance location
LOC110531778 NA coding downstream 56107 24270114 ~ 24367630 (-)
LOC110531777 LOC106577588 coding downstream 164758 24246651 ~ 24258979 (-)
LOC110531776 ddit4l coding downstream 195528 24224829 ~ 24228209 (-)
LOC110531775 LOC107706756 coding downstream 214757 24206453 ~ 24208980 (-)
focad focad coding downstream 272858 24087421 ~ 24150879 (-)
LOC110531782 LOC106577586 coding upstream 66736 24491320 ~ 24585820 (-)
LOC110531784 LOC106577585 coding upstream 168782 24593366 ~ 24601145 (-)
LOC110531786 LOC106577584 coding upstream 206113 24630697 ~ 24705729 (-)
haus6 LOC106577582 coding upstream 286505 24711089 ~ 24721117 (-)
LOC118966244 NA coding upstream 288113 24712697 ~ 24712827 (-)
G784852 LOC106577592 non-coding downstream 246270 24176911 ~ 24177467 (-)
G784848 NA non-coding downstream 254146 24169380 ~ 24169591 (-)
G784839 NA non-coding downstream 267678 24155790 ~ 24156059 (-)
G784767 NA non-coding downstream 380473 24042826 ~ 24043264 (-)
c9h4orf54 LOC106577596 non-coding downstream 384349 24038626 ~ 24049741 (-)
G784987 NA non-coding upstream 3622 24428206 ~ 24428473 (-)
G785323 NA non-coding upstream 166715 24591299 ~ 24591527 (-)
G785329 plap non-coding upstream 193610 24605485 ~ 24619053 (-)
G785370 LOC106577580 non-coding upstream 317043 24741627 ~ 24765206 (-)
G785397 NA non-coding upstream 381586 24806170 ~ 24808258 (-)
frem1a frem1 other downstream 576307 23845242 ~ 23876940 (-)
G784651 NA other downstream 615465 23806558 ~ 23808272 (-)
G784652 NA other downstream 622053 23800783 ~ 23801684 (-)
G784602 NA other downstream 684224 23737221 ~ 23739513 (-)
G785578 NA other upstream 538488 24963072 ~ 24965274 (-)
G787211 NA other upstream 866331 25290915 ~ 25291471 (-)
trmt44 trmt44 other upstream 869605 25294038 ~ 25309252 (-)
LOC110531812 LOC106577560 other upstream 930770 25338581 ~ 25365749 (-)

Expression


Co-expression Network