G785046


Basic Information

Item Value
gene id G785046
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 24475761 ~ 24476064 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU894083
ctttgtgagactcagagtagatgaacggatgatctctgcatgtgtggttcccacagtgaaccATGGAGGAGATGTGCGgctgctttgctgatgacactgtcaattatttatttagaattcaaggcacacttaaccagcatggctaccacagcattctgcagcaatacgccatcccatctggtttgtgtttagcgggactataatttgtttttcaacaggacaatggcccaaaacacctccaggctgtgtaagggctatttgaccaagaaggagagtgatggagtgctgcatcagatgacctggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU894083 True 304 lncRNA 0.47 1 24475761 24476064

Neighbor

gene id symbol gene type direction distance location
LOC110531780 bank1 coding upstream 72154 24369829 ~ 24403607 (+)
mllt3 LOC106577592 coding upstream 278017 24149046 ~ 24197744 (+)
hacd4 hacd4 coding upstream 388421 24077880 ~ 24087340 (+)
LOC110531767 LOC106577598 coding upstream 461924 23995226 ~ 24013837 (+)
LOC110531768 NA coding upstream 488420 23976530 ~ 23987341 (+)
LOC110531785 plap coding downstream 125270 24601334 ~ 24624296 (+)
LOC110531793 LOC106577583 coding downstream 243961 24720025 ~ 24726878 (+)
LOC110531798 LOC106577580 coding downstream 259601 24735665 ~ 24770025 (+)
LOC110531796 LOC106577576 coding downstream 304803 24780867 ~ 24783674 (+)
LOC110531804 NA coding downstream 318549 24794613 ~ 24795514 (+)
G785026 NA non-coding upstream 23689 24451800 ~ 24452072 (+)
G785021 NA non-coding upstream 28609 24446865 ~ 24447152 (+)
G784995 NA non-coding upstream 43571 24431955 ~ 24432190 (+)
G784980 NA non-coding upstream 52489 24423003 ~ 24423272 (+)
G784437 NA non-coding upstream 197066 24276044 ~ 24278695 (+)
G785033 NA non-coding downstream 9037 24485101 ~ 24485549 (+)
G785182 NA non-coding downstream 177494 24653558 ~ 24653869 (+)
G785196 LOC100380740 non-coding downstream 229386 24705450 ~ 24771803 (+)
G785198 LOC100380740 non-coding downstream 297699 24773763 ~ 24818004 (+)
G785262 NA non-coding downstream 333650 24809714 ~ 24810262 (+)
LOC110531763 LOC106577738 other upstream 636647 23834071 ~ 23839257 (+)
LOC110531761 LOC106577604 other upstream 671624 23802151 ~ 23804811 (+)
LOC110531760 LOC106577603 other upstream 696260 23765275 ~ 23780276 (+)
gba3 LOC106577614 other upstream 1367722 23105173 ~ 23111380 (+)
G785138 NA other downstream 106323 24582387 ~ 24582877 (+)
LOC110531788 LOC106577570 other downstream 454287 24872772 ~ 24952098 (+)
LOC110531825 LOC106577732 other downstream 1051609 25525371 ~ 25532692 (+)
G786091 NA other downstream 1069167 25545231 ~ 25546967 (+)
G785962 LOC105020693 other downstream 1236933 25712997 ~ 25742909 (+)

Expression


Co-expression Network